myRT

myRT report for GCA_002309655.1_ASM230965v1

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Seq: DBXM01000035.1 TPA_asm: Mageeibacillus sp. UBA1212 UBA1212_contig_10157, whole genome shotgun sequence (26459 bp)
Overview 1 RT 1: 23272-25927 bp Neighborhood of RT #1 [23272, 26073] PRK01076 RVT-GII GIIM Feature: gene Location: 23272-24525 bp Feature: domain Description: PRK01076 Location: 23278-24520 bp Feature: domain Description: PRK01 076 Location: 23278-24520 bp Feature: gene Location: 24573-24746 bp Feature: gene Location: 24814-26073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25018-25633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2501 8-25633 bp Feature: domain Description: GIIM Note: maturase Location: 25693-25927 bp Feature: domain Description: GIIM Note: maturase Location: 25693-25927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK01076 (L-rhamnose isomerase; Provisional), RVT-GII, GIIM (pfam08388)

Seq: DBXM01000024.1 TPA_asm: Mageeibacillus sp. UBA1212 UBA1212_contig_2736, whole genome shotgun sequence (56561 bp)
Overview 1 RT 1: 8982-17341 bp Neighborhood of RT #1 [8982, 17361] RVT-UG26 GH38N_AMII_ER_cytosolic Alpha-mann_mid KOG4342 Bac_rhamnosid_N Bac_rhamnosid Bac_rhamnosid6H Bac_rhamnosid_C Feature: gene Location: 8982-9275 bp Feature: gene Location: 9630-10151 bp Feature: gene Location: 10399-11595 bp Feature: RT Description: RVT-UG26 Note: UG26 RT Location: 10594-11215 bp Feature: RT Description: RVT-UG2 6 Note: UG2 6 RT Location: 10594-112 15 bp Feature: gene Location: 11674-14529 bp Feature: domain Description: GH38N_AMII_ER_cytosolic Location: 12010-12736 bp Feature: domain Description: GH38N_AMII_ER_cytosolic Location: 12 010-12 736 bp Feature: domain Description: Alpha-mann_mid Location: 12805-13078 bp Feature: domain Description: Alpha-mann_mid Location: 12 805-13078 bp Feature: domain Description: KOG4342 Location: 13534-14215 bp Feature: domain Description: KOG4342 Location: 13534-142 15 bp Feature: gene Location: 14791-17361 bp Feature: domain Description: Bac_rhamnosid_N Location: 15196-15595 bp Feature: domain Description: Bac_rhamnosid_N Location: 15196-15595 bp Feature: domain Description: Bac_rhamnosid Location: 15700-15979 bp Feature: domain Description: Bac_rhamnosid Location: 15700-15979 bp Feature: domain Description: Bac_rhamnosid6H Location: 16027-17110 bp Feature: domain Description: Bac_rhamnosid6H Location: 1602 7-17110 bp Feature: domain Description: Bac_rhamnosid_C Location: 17146-17341 bp Feature: domain Description: Bac_rhamnosid_C Location: 17146-17341 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG26, GH38N_AMII_ER_cytosolic (cd10789), Alpha-mann_mid (smart00872), KOG4342 (KOG4342, Alpha-mannosidase ), Bac_rhamnosid_N (pfam08531), Bac_rhamnosid (pfam05592), Bac_rhamnosid6H (pfam17389), Bac_rhamnosid_C (pfam17390)