myRT

myRT report for GCA_002313145.2_ASM231314v2

Download annotations/find similar RTs

Seq: NWFL02000004.1 Hafnia paralvei strain FDAARGOS_230 unitig_0_quiver_quiver_pilon, whole genome shotgun sequence (4734625 bp)
Overview 1 RT 1: 31159-37355 bp 2 RT 2: 3785549-3791574 bp Neighborhood of RT #1 [31159, 37355] HTH_36 RVT-Retrons AAA_15 Neighborhood of RT #2 [3785549, 3791579] CybB RVT-Retrons umuC PRK10276 Feature: gene Location: 31159-31584 bp Feature: gene Location: 32489-33010 bp Feature: domain Description: HTH_36 Location: 32675-32831 bp Feature: domain Description: HTH_36 Location: 32675-32831 bp Feature: gene Location: 33139-34263 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33322-33856 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 33322-33856 bp Feature: gene Location: 34383-36635 bp Feature: domain Description: AAA_15 Location: 34386-35397 bp Feature: domain Description: AAA_1 5 Location: 34386-35397 bp Feature: gene Location: 36777-37355 bp Feature: gene Location: 3785549-3786082 bp Feature: domain Description: CybB Location: 3785555-3786074 bp Feature: domain Description: CybB Location: 3785555-3786074 bp Feature: gene Location: 3786882-3787463 bp Feature: gene Location: 3787972-3789807 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3788107-3788389 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 37881 07-3788389 bp Feature: gene Location: 3789926-3791193 bp Feature: domain Description: umuC Location: 3789929-3790115 bp Feature: domain Description: umuC Location: 3789929-37901 1 5 bp Feature: gene Location: 3791193-3791579 bp Feature: domain Description: PRK10276 Location: 3791304-3791574 bp Feature: domain Description: PRK1 0276 Location: 3791 304-3791 574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), RVT-Retrons, AAA_15 (pfam13175), CybB (COG3038), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)