myRT

myRT report for GCA_002314725.1_ASM231472v1

Download annotations/find similar RTs

Seq: DCGV01000037.1 TPA_asm: Bacteroidales bacterium UBA1769 UBA1769_contig_132263, whole genome shotgun sequence (11167 bp)
Overview 1 RT 1: 4601-9198 bp Neighborhood of RT #1 [4601, 9198] SpoVK RVT-Retrons Feature: gene Location: 4601-6253 bp Feature: domain Description: SpoVK Location: 5399-6146 bp Feature: domain Description: SpoVK Location: 5399-61 46 bp Feature: gene Location: 6318-6554 bp Feature: gene Location: 6627-7682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6822-7410 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6822-741 0 bp Feature: gene Location: 7934-8230 bp Feature: gene Location: 8317-9198 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SpoVK (COG0464), RVT-Retrons

Seq: DCGV01000072.1 TPA_asm: Bacteroidales bacterium UBA1769 UBA1769_contig_132894, whole genome shotgun sequence (4391 bp)
Overview 1 RT 1: 1515-4330 bp Neighborhood of RT #1 [1515, 4389] PLDc_unchar1_2 RVT-Retrons FtsK Feature: gene Location: 1515-2021 bp Feature: domain Description: PLDc_unchar1_2 Location: 1560-1962 bp Feature: domain Description: PLDc_unchar1_2 Location: 1560-1962 bp Feature: gene Location: 2025-2591 bp Feature: gene Location: 2593-3576 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2770-3334 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 770-3334 bp Feature: gene Location: 3862-4389 bp Feature: domain Description: FtsK Location: 3865-4330 bp Feature: domain Description: FtsK Location: 3865-4330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_unchar1_2 (cd09128), RVT-Retrons, FtsK (COG1674)

Seq: DCGV01000104.1 TPA_asm: Bacteroidales bacterium UBA1769 UBA1769_contig_58453, whole genome shotgun sequence (7293 bp)
Overview 1 RT 1: 2239-6378 bp Neighborhood of RT #1 [2239, 7139] SF1_C_Upf1 PIN_VapC_PhoHL-ATPase HATPase_c_3 RVT-AbiP2 Feature: gene Location: 2239-3342 bp Feature: domain Description: SF1_C_Upf1 Location: 2272-2581 bp Feature: domain Description: SF1_C_Upf1 Location: 2272-2581 bp Feature: domain Description: PIN_VapC_PhoHL-ATPase Location: 2953-3319 bp Feature: domain Description: PIN_VapC_PhoHL-ATPase Location: 2953 -3 3 19 bp Feature: gene Location: 3351-5390 bp Feature: domain Description: HATPase_c_3 Location: 3468-3729 bp Feature: domain Description: HATPase_c_3 Location: 3 468-3 729 bp Feature: gene Location: 5403-7139 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5895-6378 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 5895-63 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SF1_C_Upf1 (cd18808), PIN_VapC_PhoHL-ATPase (cd09883), HATPase_c_3 (pfam13589), RVT-AbiP2

Seq: DCGV01000033.1 TPA_asm: Bacteroidales bacterium UBA1769 UBA1769_contig_84224, whole genome shotgun sequence (18429 bp)
Overview 1 RT 1: 427-5628 bp Neighborhood of RT #1 [427, 5628] RVT-UG28b Feature: gene Location: 427-1254 bp Feature: gene Location: 1361-1885 bp Feature: gene Location: 2081-3772 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 2489-3263 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 24 89-3263 bp Feature: gene Location: 4073-5278 bp Feature: gene Location: 5467-5628 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG28b