myRT

myRT report for GCA_002315415.1_ASM231541v1

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Seq: DCFI01000005.1 TPA_asm: Chryseobacterium arthrosphaerae isolate UBA1808 UBA1808_contig_272, whole genome shotgun sequence (105584 bp)
Overview 1 RT 1: 52929-58633 bp Neighborhood of RT #1 [52929, 58647] HTH_26 RVT-Retrons Acetyltransf_10 Feature: gene Location: 52929-53162 bp Feature: domain Description: HTH_26 Location: 53001-53154 bp Feature: domain Description: HTH_26 Location: 53001 -531 54 bp Feature: gene Location: 53462-54142 bp Feature: gene Location: 55023-56258 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55362-55989 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 55362-55989 bp Feature: gene Location: 56452-57723 bp Feature: gene Location: 58195-58647 bp Feature: domain Description: Acetyltransf_10 Location: 58315-58633 bp Feature: domain Description: Acetyltransf_1 0 Location: 5831 5-58633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_26 (pfam13443), RVT-Retrons, Acetyltransf_10 (pfam13673)

Seq: DCFI01000025.1 TPA_asm: Chryseobacterium arthrosphaerae isolate UBA1808 UBA1808_contig_55, whole genome shotgun sequence (232871 bp)
Overview 1 RT 1: 190843-200189 bp Neighborhood of RT #1 [190843, 200189] PRK05414 RVT-Retrons WGR_DNA_ligase Feature: gene Location: 190843-192837 bp Feature: domain Description: PRK05414 Location: 191068-192787 bp Feature: domain Description: PRK05414 Location: 191068-192 787 bp Feature: gene Location: 193154-193393 bp Feature: gene Location: 193633-195147 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194173-194794 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 194173-194794 bp Feature: gene Location: 195192-198536 bp Feature: domain Description: WGR_DNA_ligase Location: 195207-195426 bp Feature: domain Description: WGR_DNA_ligase Location: 1952 07-19542 6 bp Feature: gene Location: 198540-200189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05414 (urocanate hydratase; Provisional), RVT-Retrons, WGR_DNA_ligase (cd07998)

Seq: DCFI01000032.1 TPA_asm: Chryseobacterium arthrosphaerae isolate UBA1808 UBA1808_contig_96, whole genome shotgun sequence (234030 bp)
Overview 1 RT 1: 160944-168962 bp Neighborhood of RT #1 [160944, 168982] guaA PRK14975 RVT-UG9 ComA-like_MBL-fold Acetyltransf_1 nitrilase_Rim1_like Feature: gene Location: 160944-162518 bp Feature: domain Description: guaA Location: 160995-162516 bp Feature: domain Description: guaA Location: 160995-162516 bp Feature: gene Location: 162568-164040 bp Feature: domain Description: PRK14975 Location: 162853-163990 bp Feature: domain Description: PRK14975 Location: 162853 -163 990 bp Feature: gene Location: 164037-166421 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 164952-165588 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 164952-165588 bp Feature: gene Location: 166405-167394 bp Feature: domain Description: ComA-like_MBL-fold Location: 166411-167131 bp Feature: domain Description: ComA-like_MBL-fold Location: 166411-16713 1 bp Feature: gene Location: 167480-168982 bp Feature: domain Description: Acetyltransf_1 Location: 167612-167891 bp Feature: domain Description: Acetyltransf_1 Location: 167612-167891 bp Feature: domain Description: nitrilase_Rim1_like Location: 168131-168962 bp Feature: domain Description: nitrilase_Rim1_like Location: 16813 1-168962 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT guaA (PRK00074), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, ComA-like_MBL-fold (cd07731), Acetyltransf_1 (pfam00583), nitrilase_Rim1_like (cd07574)