myRT

myRT report for GCA_002316215.1_ASM231621v1

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Seq: DCDB01000237.1 TPA_asm: Lachnospiraceae bacterium UBA1066 UBA1066_contig_13063, whole genome shotgun sequence (4332 bp)
Overview 1 RT 1: 2264-4253 bp Neighborhood of RT #1 [2264, 4330] VOC_like PgsA RVT-GII GIIM Feature: gene Location: 2264-2626 bp Feature: domain Description: VOC_like Location: 2267-2624 bp Feature: domain Description: VOC_like Location: 2267-2624 bp Feature: gene Location: 2652-3173 bp Feature: domain Description: PgsA Location: 2661-3111 bp Feature: domain Description: PgsA Location: 2661 -31 1 1 bp Feature: gene Location: 3581-4330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3587-3977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3587-3977 bp Feature: domain Description: GIIM Note: maturase Location: 4043-4253 bp Feature: domain Description: GIIM Note: maturase Location: 4043-4253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VOC_like (cd16355), PgsA (COG0558), RVT-GII, GIIM (pfam08388)

Seq: DCDB01000306.1 TPA_asm: Lachnospiraceae bacterium UBA1066 UBA1066_contig_35325, whole genome shotgun sequence (3297 bp)
Overview 1 RT 1: 57-3295 bp Neighborhood of RT #1 [57, 3295] RVT-CRISPR-like COG4951 Feature: gene Location: 57-3113 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 264-867 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 64-867 bp Feature: domain Description: COG4951 Location: 1449-2184 bp Feature: domain Description: COG4951 Location: 1449-2 184 bp Feature: gene Location: 3137-3295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, COG4951 (Uncharacterized protein )