myRT

myRT report for GCA_002318635.1_ASM231863v1

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Seq: NQXX01000069.1 Pseudomonas congelans strain LP205a seq108_Contig69, whole genome shotgun sequence (53624 bp)
Overview 1 RT 1: 17436-23592 bp Neighborhood of RT #1 [17436, 23609] TPR HEPN_LA2681 DUF4209 RVT-UG12 TM_PBP1_LivH_like Feature: gene Location: 17436-18680 bp Ori: PBQ07766.1 Feature: domain Description: TPR Location: 17490-17769 bp Feature: domain Description: TPR Location: 1 7490-1 7769 bp Feature: domain Description: HEPN_LA2681 Location: 17976-18597 bp Feature: domain Description: HEPN_LA2681 Location: 1 7976-1 8597 bp Feature: gene Location: 18707-20635 bp Ori: PBQ07767.1 Feature: domain Description: DUF4209 Location: 20240-20507 bp Feature: domain Description: DUF4209 Location: 20240-20507 bp Feature: gene Location: 20737-22452 bp Ori: PBQ07768.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 21070-21529 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 21 070-21 529 bp Feature: gene Location: 22543-23133 bp Feature: gene Location: 23259-23609 bp Feature: domain Description: TM_PBP1_LivH_like Location: 23265-23592 bp Feature: domain Description: TM_PBP1 _LivH_like Location: 23265-23592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), HEPN_LA2681 (pfam18733), DUF4209 (pfam13910), RVT-UG12, TM_PBP1_LivH_like (cd06582)

Seq: NQXX01000068.1 Pseudomonas congelans strain LP205a seq108_Contig68, whole genome shotgun sequence (35198 bp)
Overview 1 RT 1: 18238-24365 bp Neighborhood of RT #1 [18238, 24365] YycJ-like_MBL-fold PRK09362 RVT-Retrons TIR_2 Feature: gene Location: 18238-18996 bp Ori: PBQ07824.1 Feature: domain Description: YycJ-like_MBL-fold Location: 18253-18796 bp Feature: domain Description: YycJ-like_MBL-fold Location: 182 53-18796 bp Feature: gene Location: 19025-19735 bp Ori: PBQ07825.1 Feature: domain Description: PRK09362 Location: 19028-19724 bp Feature: domain Description: PRK09362 Location: 1902 8-1972 4 bp Feature: gene Location: 20433-21941 bp Ori: PBQ07826.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20622-21213 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 062 2 -2 12 13 bp Feature: domain Description: TIR_2 Location: 21549-21906 bp Feature: domain Description: TIR_2 Location: 2 1549-2 1906 bp Feature: gene Location: 21974-22558 bp Feature: gene Location: 22695-24365 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YycJ-like_MBL-fold (cd07733), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), RVT-Retrons, TIR_2 (pfam13676)