myRT

myRT report for GCA_002318665.1_ASM231866v1

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Seq: NHSS01000222.1 Pseudomonas syringae strain RMX.24.a.1 seq113_Contig262, whole genome shotgun sequence (52927 bp)
Overview 1 RT 1: 8947-14706 bp Neighborhood of RT #1 [8947, 14706] YycJ-like_MBL-fold PRK09362 RVT-Retrons AAA_21 Feature: gene Location: 8947-9705 bp Ori: PBP30972.1 Feature: domain Description: YycJ-like_MBL-fold Location: 8962-9505 bp Feature: domain Description: YycJ-like_MBL-fold Location: 8962-9505 bp Feature: gene Location: 9734-10444 bp Ori: PBP30973.1 Feature: domain Description: PRK09362 Location: 9737-10433 bp Feature: domain Description: PRK09362 Location: 9737-1 0433 bp Feature: gene Location: 11371-12327 bp Ori: PBP30974.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11473-12043 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 473-1 2043 bp Feature: gene Location: 12324-13664 bp Ori: PBP30975.1 Feature: domain Description: AAA_21 Location: 12411-13071 bp Feature: domain Description: AAA_21 Location: 1 241 1 -1 3071 bp Feature: gene Location: 14014-14706 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YycJ-like_MBL-fold (cd07733), PRK09362 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Reviewed), RVT-Retrons, AAA_21 (pfam13304)

Seq: NHSS01000160.1 Pseudomonas syringae strain RMX.24.a.1 seq113_Contig173, whole genome shotgun sequence (113521 bp)
Overview 1 RT 1: 9813-17207 bp Neighborhood of RT #1 [9813, 17207] RVT-UG2 MS_channel Feature: gene Location: 9813-11933 bp Feature: gene Location: 12013-12264 bp Feature: gene Location: 13532-14407 bp Ori: PBP35515.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13535-14114 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 13535-14114 bp Feature: gene Location: 15367-15969 bp Ori: PBP35516.1 Feature: domain Description: MS_channel Location: 15385-15862 bp Feature: domain Description: MS_channel Location: 15385-15862 bp Feature: gene Location: 16761-17207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, MS_channel (pfam00924)

Seq: NHSS01000027.1 Pseudomonas syringae strain RMX.24.a.1 seq113_Contig28, whole genome shotgun sequence (118872 bp)
Overview 1 RT 1: 21995-30042 bp Neighborhood of RT #1 [21995, 30042] RVT-UG2 MscS Feature: gene Location: 21995-24115 bp Feature: gene Location: 24195-24446 bp Feature: gene Location: 25714-26589 bp Ori: PBP47452.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 25717-26296 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 25717-26296 bp Feature: gene Location: 27549-28856 bp Ori: PBP47375.1 Feature: domain Description: MscS Location: 27654-28764 bp Feature: domain Description: MscS Location: 27654-28764 bp Feature: gene Location: 29596-30042 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG2, MscS (COG0668)