myRT

myRT report for GCA_002319355.1_ASM231935v1

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Seq: NWBF01000049.1 Escherichia coli strain 65-57 65-57_NODE_49_length_28144_cov_107.29_pilon, whole genome shotgun sequence (28144 bp)
Overview 1 RT 1: 184-4528 bp Neighborhood of RT #1 [184, 4923] PHA02517 RVT-GII GIIM PHA02517 DNA2 MTES_1575 Feature: gene Location: 184-609 bp Feature: domain Description: PHA02517 Location: 274-610 bp Feature: domain Description: PHA0251 7 Location: 274-61 0 bp Feature: gene Location: 542-973 bp Feature: gene Location: 1267-2778 bp Ori: PBR09975.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1540-2272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 540-2272 bp Feature: domain Description: GIIM Note: maturase Location: 2347-2524 bp Feature: domain Description: GIIM Note: maturase Location: 2347-2524 bp Feature: gene Location: 2859-3317 bp Feature: domain Description: PHA02517 Location: 2862-3309 bp Feature: domain Description: PHA0251 7 Location: 2862-3309 bp Feature: gene Location: 3538-4923 bp Feature: domain Description: DNA2 Location: 3547-4165 bp Feature: domain Description: DNA2 Location: 3547-41 65 bp Feature: domain Description: MTES_1575 Location: 4237-4528 bp Feature: domain Description: MTES_1 575 Location: 4237-4528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DNA2 (COG1112), MTES_1575 (pfam18741)

Seq: NWBF01000036.1 Escherichia coli strain 65-57 65-57_NODE_36_length_46322_cov_149.328_pilon, whole genome shotgun sequence (46322 bp)
Overview 1 RT 1: 33449-37085 bp Neighborhood of RT #1 [33449, 37297] PRK10597 SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 33449-33697 bp Ori: PBR12164.1 Feature: domain Description: PRK10597 Location: 33452-33692 bp Feature: domain Description: PRK10597 Location: 33452 -33692 bp Feature: gene Location: 33920-34471 bp Ori: PBR12165.1 Feature: domain Description: SLATT_5 Location: 33926-34442 bp Feature: domain Description: SLATT_5 Location: 3392 6-34442 bp Feature: gene Location: 34449-35819 bp Ori: PBR12166.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 34677-35283 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 34677-352 83 bp Feature: gene Location: 35927-36214 bp Feature: gene Location: 36257-37297 bp Ori: PBR12167.1 Feature: domain Description: Peptidase_S74 Location: 36938-37085 bp Feature: domain Description: Peptidase_S74 Location: 36938-37085 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10597 (DNA damage-inducible protein I; Provisional), SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)