myRT

myRT report for GCA_002320995.1_ASM232099v1

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Seq: DCLJ01000164.1 TPA_asm: Bacillaceae bacterium UBA1651 UBA1651_contig_1423, whole genome shotgun sequence (3585 bp)
Overview 1 RT 1: 1-3519 bp Neighborhood of RT #1 [1, 3584] RVT-GII HNHc HsdM Feature: gene Location: 1-714 bp Feature: gene Location: 820-2625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1114-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 4-1 81 0 bp Feature: domain Description: HNHc Note: nucleases Location: 2362-2509 bp Feature: domain Description: HNHc Note: nucleases Location: 2362-2509 bp Feature: gene Location: 3324-3584 bp Feature: domain Description: HsdM Location: 3333-3519 bp Feature: domain Description: HsdM Location: 3333-351 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), HsdM (COG0286)

Seq: DCLJ01000092.1 TPA_asm: Bacillaceae bacterium UBA1651 UBA1651_contig_200, whole genome shotgun sequence (41739 bp)
Overview 1 RT 1: 28541-34378 bp Neighborhood of RT #1 [28541, 34530] RVT-GII HNHc E1_enzyme_family Prok-JAB Feature: gene Location: 28541-29269 bp Feature: gene Location: 29271-29804 bp Feature: gene Location: 30461-32401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30812-31541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30812 -31541 bp Feature: domain Description: HNHc Note: nucleases Location: 32099-32264 bp Feature: domain Description: HNHc Note: nucleases Location: 32 099-32 2 64 bp Feature: gene Location: 33142-33561 bp Feature: domain Description: E1_enzyme_family Location: 33202-33475 bp Feature: domain Description: E1_enzyme_family Location: 332 02 -33475 bp Feature: gene Location: 33562-34530 bp Feature: domain Description: Prok-JAB Location: 34210-34378 bp Feature: domain Description: Prok-JAB Location: 342 10-34378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), E1_enzyme_family (cl22428), Prok-JAB (pfam14464)

Seq: DCLJ01000049.1 TPA_asm: Bacillaceae bacterium UBA1651 UBA1651_contig_2005, whole genome shotgun sequence (3866 bp)
Overview 1 RT 1: 2-3561 bp Neighborhood of RT #1 [2, 3863] RVT-GII GIIM group_II_RT_mat RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 2-265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-92 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-92 bp Feature: domain Description: GIIM Note: maturase Location: 131-254 bp Feature: domain Description: GIIM Note: maturase Location: 13 1-254 bp Feature: gene Location: 300-518 bp Feature: gene Location: 1113-1415 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1203-1377 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 1203 -13 77 bp Feature: gene Location: 1439-2431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1445-2057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1445-2057 bp Feature: domain Description: GIIM Note: maturase Location: 2123-2342 bp Feature: domain Description: GIIM Note: maturase Location: 2123 -23 42 bp Feature: gene Location: 2610-3863 bp Feature: domain Description: DDE_Tnp_1 Location: 2946-3561 bp Feature: domain Description: DDE_Tnp_1 Location: 2946-3 561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), group_II_RT_mat (TIGR04416), DDE_Tnp_1 (pfam01609)

Seq: DCLJ01000025.1 TPA_asm: Bacillaceae bacterium UBA1651 UBA1651_contig_464, whole genome shotgun sequence (20639 bp)
Overview 1 RT 1: 15075-19498 bp Neighborhood of RT #1 [15075, 20019] RVT-GII GIIM DEXHc_Mot1 Feature: gene Location: 15075-15320 bp Feature: gene Location: 15389-16327 bp Feature: gene Location: 17076-18941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17376-18081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17376-18081 bp Feature: domain Description: GIIM Note: maturase Location: 18168-18351 bp Feature: domain Description: GIIM Note: maturase Location: 18168-18351 bp Feature: gene Location: 19219-20019 bp Feature: domain Description: DEXHc_Mot1 Location: 19252-19498 bp Feature: domain Description: DEXHc_Mot1 Location: 19252-194 98 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DEXHc_Mot1 (cd17999)

Seq: DCLJ01000073.1 TPA_asm: Bacillaceae bacterium UBA1651 UBA1651_contig_960, whole genome shotgun sequence (4349 bp)
Overview 1 RT 1: 935-4347 bp Neighborhood of RT #1 [935, 4347] RVT-GII GIIM Feature: gene Location: 935-1531 bp Feature: gene Location: 1544-1867 bp Feature: gene Location: 1989-3323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2265-2919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2265 -2919 bp Feature: domain Description: GIIM Note: maturase Location: 3003-3213 bp Feature: domain Description: GIIM Note: maturase Location: 3003-3213 bp Feature: gene Location: 4030-4347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)