myRT

myRT report for GCA_002323245.1_ASM232324v1

Download annotations/find similar RTs

Seq: DCPU01000016.1 TPA_asm: Mariprofundus sp. UBA1536 UBA1536_contig_308, whole genome shotgun sequence (181590 bp)
Overview 1 RT 1: 7043-10747 bp 2 RT 2: 22775-30103 bp Neighborhood of RT #1 [7043, 10797] DUF1828 RVT-UG11 VapI ImmA Neighborhood of RT #2 [22775, 30103] ORF6N PRK09737 RMtype1_S_HinAWORF1578P-TRD2-CR2_like RMtype1_S_HinAWORF1578P-TRD2-CR2_like RVT-UG15 COG0610 Feature: gene Location: 7043-7819 bp Feature: domain Description: DUF1828 Location: 7136-7415 bp Feature: domain Description: DUF1 828 Location: 71 36-741 5 bp Feature: gene Location: 7841-7978 bp Feature: gene Location: 8215-8973 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8344-8791 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 8344-8791 bp Feature: gene Location: 9393-9722 bp Feature: gene Location: 9715-10797 bp Feature: domain Description: VapI Location: 9760-9985 bp Feature: domain Description: VapI Location: 9760-9985 bp Feature: domain Description: ImmA Location: 10480-10747 bp Feature: domain Description: ImmA Location: 1 0480-1 0747 bp Feature: gene Location: 22775-23791 bp Feature: domain Description: ORF6N Location: 22958-23210 bp Feature: domain Description: ORF6N Location: 22958-2321 0 bp Feature: gene Location: 23607-25058 bp Feature: domain Description: PRK09737 Location: 23793-23907 bp Feature: domain Description: PRK09737 Location: 23793-23907 bp Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2-CR2_like Location: 24105-24360 bp Feature: domain Description: RMtype1 _S_HinAWORF1 578P-TRD2-CR2_like Location: 241 05-24360 bp Feature: domain Description: RMtype1_S_HinAWORF1578P-TRD2-CR2_like Location: 24480-25032 bp Feature: domain Description: RMtype1 _S_HinAWORF1 578P-TRD2-CR2_like Location: 24480-25032 bp Feature: gene Location: 25055-26683 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 25601-26003 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 25601 -26003 bp Feature: gene Location: 26680-29856 bp Feature: domain Description: COG0610 Location: 26692-29764 bp Feature: domain Description: COG061 0 Location: 26692-29764 bp Feature: gene Location: 29906-30103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1828 (pfam08861), RVT-UG11, VapI (COG3093), ImmA (COG2856), ORF6N (pfam10543), PRK09737 (type I restriction-modification system specificity subunit), RMtype1_S_HinAWORF1578P-TRD2-CR2_like (cd17516), RVT-UG15, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )