myRT

myRT report for GCA_002323285.1_ASM232328v1

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Seq: DCPX01000008.1 TPA_asm: Acinetobacter ursingii isolate UBA1533 UBA1533_contig_15, whole genome shotgun sequence (161187 bp)
Overview 1 RT 1: 39140-44151 bp 2 RT 2: 52493-58377 bp Neighborhood of RT #1 [39140, 44789] COG5377 RVT_N RVT-GII GIIM KAP_NTPase Neighborhood of RT #2 [52493, 58379] T5orf172 RVT-UG2 COG3177 prfC Feature: gene Location: 39140-39601 bp Feature: domain Description: COG5377 Location: 39224-39581 bp Feature: domain Description: COG5377 Location: 39224-39581 bp Feature: gene Location: 39650-39871 bp Feature: gene Location: 40194-41774 bp Feature: domain Description: RVT_N Location: 40251-40494 bp Feature: domain Description: RVT_N Location: 40251 -40494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40539-41190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40539-41 1 90 bp Feature: domain Description: GIIM Note: maturase Location: 41241-41475 bp Feature: domain Description: GIIM Note: maturase Location: 41 241 -41 475 bp Feature: gene Location: 41965-42693 bp Feature: gene Location: 42996-44789 bp Feature: domain Description: KAP_NTPase Location: 43038-44151 bp Feature: domain Description: KAP_NTPase Location: 43038-441 51 bp Feature: gene Location: 52493-52780 bp Feature: gene Location: 52785-53699 bp Feature: domain Description: T5orf172 Location: 53310-53634 bp Feature: domain Description: T5orf1 72 Location: 5331 0-53634 bp Feature: gene Location: 54087-55487 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 54324-55218 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 54324-5521 8 bp Feature: gene Location: 55603-56607 bp Feature: domain Description: COG3177 Location: 55609-56500 bp Feature: domain Description: COG31 77 Location: 55609-56500 bp Feature: gene Location: 56790-58379 bp Feature: domain Description: prfC Location: 56805-58377 bp Feature: domain Description: prfC Location: 56805-58377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5377 (Phage-related protein, predicted endonuclease ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KAP_NTPase (pfam07693), T5orf172 (smart00974), RVT-UG2, COG3177 (Fic family protein ), prfC (TIGR00503)