myRT

myRT report for GCA_002324175.1_ASM232417v1

Download annotations/find similar RTs

Seq: NTDF01000047.1 Escherichia coli strain KCJK501 NODE_6_length_254559_cov_27.333_ID_11, whole genome shotgun sequence (254559 bp)
Overview 1 RT 1: 139891-143770 bp Neighborhood of RT #1 [139891, 143775] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 139891-140346 bp Feature: domain Description: dut Location: 139894-140341 bp Feature: domain Description: dut Location: 1 39894-1 40341 bp Feature: gene Location: 140453-141049 bp Feature: domain Description: slmA Location: 140459-141035 bp Feature: domain Description: slmA Location: 1 40459-1 41 035 bp Feature: gene Location: 141095-142054 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 141230-141779 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 41 230-1 41 779 bp Feature: gene Location: 142352-142993 bp Feature: domain Description: pyrE Location: 142355-142988 bp Feature: domain Description: pyrE Location: 1 42355-1 42988 bp Feature: gene Location: 143059-143775 bp Feature: domain Description: rph Location: 143062-143770 bp Feature: domain Description: rph Location: 1 43062-1 43770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: NTDF01000052.1 Escherichia coli strain KCJK501 NODE_33_length_24760_cov_79.1919_ID_65, whole genome shotgun sequence (24760 bp)
Overview 1 RT 1: 11654-15128 bp Neighborhood of RT #1 [11654, 15145] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 11654-11962 bp Feature: domain Description: Rep_3 Location: 11660-11924 bp Feature: domain Description: Rep_3 Location: 11660-1192 4 bp Feature: gene Location: 11972-12669 bp Feature: domain Description: Zn_Tnp_IS1 Location: 11978-12080 bp Feature: domain Description: Zn_Tnp_IS1 Location: 11978-12 080 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12101-12233 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12 101-12 2 33 bp Feature: gene Location: 12821-14305 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13223-13913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 2 3-13913 bp Feature: gene Location: 14305-14556 bp Feature: gene Location: 14714-15145 bp Feature: domain Description: PRK10276 Location: 14765-15128 bp Feature: domain Description: PRK102 76 Location: 14765-1512 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)