myRT

myRT report for GCA_002324215.1_ASM232421v1

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Seq: NTDQ01000065.1 Escherichia coli strain KCJK2722 NODE_25_length_65515_cov_23.7981_ID_49, whole genome shotgun sequence (65515 bp)
Overview 1 RT 1: 16459-20984 bp Neighborhood of RT #1 [16459, 21823] YeeP RVT-GII HTH_17 PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF Feature: gene Location: 16459-17334 bp Feature: domain Description: YeeP Location: 16474-17332 bp Feature: domain Description: YeeP Location: 1 6474-1 7332 bp Feature: gene Location: 17560-17802 bp Feature: gene Location: 17792-18074 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17798-17888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7798-1 7888 bp Feature: gene Location: 18363-18542 bp Feature: domain Description: HTH_17 Location: 18381-18525 bp Feature: domain Description: HTH_1 7 Location: 1 8381 -1 8525 bp Feature: gene Location: 18557-21823 bp Feature: domain Description: PLDc_N_DEXD_c Location: 18572-18983 bp Feature: domain Description: PLDc_N_DEXD_c Location: 1 8572-1 8983 bp Feature: domain Description: DEXDc_RapA Location: 19244-19811 bp Feature: domain Description: DEXDc_RapA Location: 1 9244-1 981 1 bp Feature: domain Description: SF2_C_SNF Location: 20390-20984 bp Feature: domain Description: SF2_C_SNF Location: 20390-20984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-GII, HTH_17 (pfam12728), PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793)