myRT

myRT report for GCA_002324415.1_ASM232441v1

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Seq: NTDD01000097.1 Escherichia coli strain KCJK467 NODE_46_length_24649_cov_67.406_ID_91, whole genome shotgun sequence (24649 bp)
Overview 1 RT 1: 11543-15017 bp Neighborhood of RT #1 [11543, 15034] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 11543-11851 bp Feature: domain Description: Rep_3 Location: 11549-11813 bp Feature: domain Description: Rep_3 Location: 1 1 549-1 1 81 3 bp Feature: gene Location: 11861-12558 bp Feature: domain Description: Zn_Tnp_IS1 Location: 11867-11969 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1 1 867-1 1 969 bp Feature: domain Description: HTH_Tnp_IS1 Location: 11990-12122 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1 1 990-1 21 22 bp Feature: gene Location: 12710-14194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13112-13802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 1 2-1 3802 bp Feature: gene Location: 14194-14445 bp Feature: gene Location: 14603-15034 bp Feature: domain Description: PRK10276 Location: 14654-15017 bp Feature: domain Description: PRK1 0276 Location: 1 4654-1 501 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NTDD01000042.1 Escherichia coli strain KCJK467 NODE_15_length_112678_cov_24.7679_ID_29, whole genome shotgun sequence (112678 bp)
Overview 1 RT 1: 9735-13614 bp Neighborhood of RT #1 [9735, 13619] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 9735-10190 bp Feature: domain Description: dut Location: 9738-10185 bp Feature: domain Description: dut Location: 9738-10185 bp Feature: gene Location: 10297-10893 bp Feature: domain Description: slmA Location: 10303-10879 bp Feature: domain Description: slmA Location: 10303-10879 bp Feature: gene Location: 10939-11898 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11074-11623 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11074-1162 3 bp Feature: gene Location: 12196-12837 bp Feature: domain Description: pyrE Location: 12199-12832 bp Feature: domain Description: pyrE Location: 12 199-12 832 bp Feature: gene Location: 12903-13619 bp Feature: domain Description: rph Location: 12906-13614 bp Feature: domain Description: rph Location: 12 906-13614 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), dut (TIGR00576)