myRT

myRT report for GCA_002324495.1_ASM232449v1

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Seq: NTEF01000013.1 Escherichia coli strain KCJK4148 NODE_31_length_41394_cov_27.3039_ID_61, whole genome shotgun sequence (41394 bp)
Overview 1 RT 1: 38643-41270 bp Neighborhood of RT #1 [38643, 41272] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII Feature: gene Location: 38643-39998 bp Feature: domain Description: LZ_Tnp_IS66 Location: 38760-38973 bp Feature: domain Description: LZ_Tnp_IS66 Location: 38760-38973 bp Feature: domain Description: zf-IS66 Location: 38994-39126 bp Feature: domain Description: zf-IS66 Location: 38994-391 26 bp Feature: domain Description: DDE_Tnp_IS66 Location: 39171-39999 bp Feature: domain Description: DDE_Tnp_IS66 Location: 391 71 -39999 bp Feature: gene Location: 39911-40492 bp Feature: gene Location: 40616-41272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40712-41270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4071 2-41 270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: NTEF01000010.1 Escherichia coli strain KCJK4148 NODE_43_length_22168_cov_39.8762_ID_85, whole genome shotgun sequence (22168 bp)
Overview 1 RT 1: 9616-13069 bp Neighborhood of RT #1 [9616, 13107] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 9616-10047 bp Feature: domain Description: PRK10276 Location: 9667-10030 bp Feature: domain Description: PRK102 76 Location: 9667-10030 bp Feature: gene Location: 10205-10456 bp Feature: gene Location: 10456-11940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10858-11548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10858-11548 bp Feature: gene Location: 12092-12789 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12098-12200 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12 098-12 2 00 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12221-12353 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12 2 2 1-12 353 bp Feature: gene Location: 12799-13107 bp Feature: domain Description: Rep_3 Location: 12805-13069 bp Feature: domain Description: Rep_3 Location: 12 805-13069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)