myRT

myRT report for GCA_002324575.1_ASM232457v1

Download annotations/find similar RTs

Seq: NTEA01000068.1 Escherichia coli strain KCJK4127 NODE_46_length_22168_cov_33.5693_ID_91, whole genome shotgun sequence (22168 bp)
Overview 1 RT 1: 9062-12536 bp Neighborhood of RT #1 [9062, 12553] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 9062-9370 bp Feature: domain Description: Rep_3 Location: 9068-9332 bp Feature: domain Description: Rep_3 Location: 9068-9332 bp Feature: gene Location: 9380-10077 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9386-9488 bp Feature: domain Description: Zn_Tnp_IS1 Location: 9386-9488 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9509-9641 bp Feature: domain Description: HTH_Tnp_IS1 Location: 9509-9641 bp Feature: gene Location: 10229-11713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10631-11321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0631 -1 1 321 bp Feature: gene Location: 11713-11964 bp Feature: gene Location: 12122-12553 bp Feature: domain Description: PRK10276 Location: 12173-12536 bp Feature: domain Description: PRK1 0276 Location: 1 21 73-1 2536 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759)

Seq: NTEA01000026.1 Escherichia coli strain KCJK4127 NODE_35_length_41469_cov_23.4712_ID_69, whole genome shotgun sequence (41469 bp)
Overview 1 RT 1: 123-2753 bp Neighborhood of RT #1 [123, 2752] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 123-779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219-777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 19-777 bp Feature: gene Location: 903-1484 bp Feature: gene Location: 1397-2752 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1514-1727 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1514-172 7 bp Feature: domain Description: zf-IS66 Location: 1748-1880 bp Feature: domain Description: zf-IS66 Location: 1748-1880 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1925-2753 bp Feature: domain Description: DDE_Tnp_IS66 Location: 192 5-2 753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)