myRT

myRT report for GCA_002324645.1_ASM232464v1

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Seq: NTEE01000009.1 Escherichia coli strain KCJK4144 NODE_33_length_40133_cov_23.5825_ID_65, whole genome shotgun sequence (40133 bp)
Overview 1 RT 1: 123-2753 bp Neighborhood of RT #1 [123, 2752] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 123-779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219-777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 9-777 bp Feature: gene Location: 903-1484 bp Feature: gene Location: 1397-2752 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1514-1727 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 51 4-1 727 bp Feature: domain Description: zf-IS66 Location: 1748-1880 bp Feature: domain Description: zf-IS66 Location: 1 748-1 880 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1925-2753 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 925-2753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)

Seq: NTEE01000023.1 Escherichia coli strain KCJK4144 NODE_45_length_16373_cov_20.379_ID_89, whole genome shotgun sequence (16373 bp)
Overview 1 RT 1: 9616-13069 bp Neighborhood of RT #1 [9616, 13107] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 9616-10047 bp Feature: domain Description: PRK10276 Location: 9667-10030 bp Feature: domain Description: PRK102 76 Location: 9667-10030 bp Feature: gene Location: 10205-10456 bp Feature: gene Location: 10456-11940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10858-11548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10858-11548 bp Feature: gene Location: 12092-12789 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12098-12200 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12 098-12 2 00 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12221-12353 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12 2 2 1-12 353 bp Feature: gene Location: 12799-13107 bp Feature: domain Description: Rep_3 Location: 12805-13069 bp Feature: domain Description: Rep_3 Location: 12 805-13069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)