myRT

myRT report for GCA_002324695.1_ASM232469v1

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Seq: NTEK01000145.1 Escherichia coli strain KCJK4181 NODE_64_length_15349_cov_19.9105_ID_129, whole genome shotgun sequence (15349 bp)
Overview 1 RT 1: 9616-13069 bp Neighborhood of RT #1 [9616, 13107] PRK10276 RVT-GII Zn_Tnp_IS1 HTH_Tnp_IS1 Rep_3 Feature: gene Location: 9616-10047 bp Feature: domain Description: PRK10276 Location: 9667-10030 bp Feature: domain Description: PRK1 0276 Location: 9667-1 0030 bp Feature: gene Location: 10205-10456 bp Feature: gene Location: 10456-11940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10858-11548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0858-1 1 548 bp Feature: gene Location: 12092-12789 bp Feature: domain Description: Zn_Tnp_IS1 Location: 12098-12200 bp Feature: domain Description: Zn_Tnp_IS1 Location: 1 2098-1 2200 bp Feature: domain Description: HTH_Tnp_IS1 Location: 12221-12353 bp Feature: domain Description: HTH_Tnp_IS1 Location: 1 2221 -1 2353 bp Feature: gene Location: 12799-13107 bp Feature: domain Description: Rep_3 Location: 12805-13069 bp Feature: domain Description: Rep_3 Location: 1 2805-1 3069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), Rep_3 (pfam01051), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: NTEK01000044.1 Escherichia coli strain KCJK4181 NODE_41_length_40100_cov_25.1011_ID_83, whole genome shotgun sequence (40100 bp)
Overview 1 RT 1: 123-2753 bp Neighborhood of RT #1 [123, 2752] RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 Feature: gene Location: 123-779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 219-777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 19-777 bp Feature: gene Location: 903-1484 bp Feature: gene Location: 1397-2752 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1514-1727 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1514-172 7 bp Feature: domain Description: zf-IS66 Location: 1748-1880 bp Feature: domain Description: zf-IS66 Location: 1748-1880 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1925-2753 bp Feature: domain Description: DDE_Tnp_IS66 Location: 192 5-2 753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050)