myRT

myRT report for GCA_002324805.1_ASM232480v1

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Seq: NTEM01000133.1 Escherichia coli strain KCJK4405 NODE_83_length_5226_cov_15.0514_ID_165, whole genome shotgun sequence (5226 bp)
Overview 1 RT 1: 122-2915 bp Neighborhood of RT #1 [122, 2941] RVT-GII RVT-GII DcuC Feature: gene Location: 122-324 bp Feature: gene Location: 372-536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 384-531 bp Feature: gene Location: 488-934 bp Ori: PBT95596.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 794-896 bp Feature: gene Location: 1300-1527 bp Feature: gene Location: 1580-2941 bp Ori: PBT95597.1 Feature: domain Description: DcuC Location: 1583-2915 bp Feature: domain Description: DcuC Location: 1 583-291 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DcuC (TIGR00771)

Seq: NTEM01000011.1 Escherichia coli strain KCJK4405 NODE_14_length_103245_cov_17.4645_ID_27, whole genome shotgun sequence (103245 bp)
Overview 1 RT 1: 63056-68114 bp Neighborhood of RT #1 [63056, 68131] PRK14702 PRK09692 RVT-UG7 Psu Feature: gene Location: 63056-63265 bp Feature: domain Description: PRK14702 Location: 63062-63254 bp Feature: domain Description: PRK14702 Location: 63062 -632 54 bp Feature: gene Location: 63714-64898 bp Ori: PBU02031.1 Feature: domain Description: PRK09692 Location: 63720-64875 bp Feature: domain Description: PRK09692 Location: 6372 0-64875 bp Feature: gene Location: 64891-66519 bp Ori: PBU02032.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 65299-65728 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 652 99-6572 8 bp Feature: gene Location: 66516-67256 bp Feature: gene Location: 67559-68131 bp Ori: PBU02034.1 Feature: domain Description: Psu Location: 67577-68114 bp Feature: domain Description: Psu Location: 67577-68114 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK14702 (insertion element IS2 transposase InsD; Provisional), PRK09692 (Integrase; provisional), RVT-UG7, Psu (pfam07455)