myRT

myRT report for GCA_002324865.1_ASM232486v1

Download annotations/find similar RTs

Seq: NTJF01000023.1 Xanthomonadaceae bacterium NML93-0831 93-0831_23, whole genome shotgun sequence (13867 bp)
Overview 1 RT 1: 325-7047 bp Neighborhood of RT #1 [325, 7067] MATE_yoeA_like RVT-UG13 ribokinase_group_A PRK13927 Feature: gene Location: 325-750 bp Feature: gene Location: 868-2379 bp Ori: PBS17554.1 Feature: domain Description: MATE_yoeA_like Location: 928-2236 bp Feature: domain Description: MATE_yoeA_like Location: 928-2236 bp Feature: gene Location: 2689-4509 bp Ori: PBS17555.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 3106-3571 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 31 06-3571 bp Feature: gene Location: 4873-5820 bp Ori: PBS17556.1 Feature: domain Description: ribokinase_group_A Location: 4882-5740 bp Feature: domain Description: ribokinase_group_A Location: 4882-5740 bp Feature: gene Location: 6024-7067 bp Ori: PBS17557.1 Feature: domain Description: PRK13927 Location: 6045-7047 bp Feature: domain Description: PRK1 3927 Location: 6045-7047 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MATE_yoeA_like (cd13138), RVT-UG13, ribokinase_group_A (cd01942), PRK13927 (rod shape-determining protein MreB; Provisional)

Seq: NTJF01000001.1 Xanthomonadaceae bacterium NML93-0831 93-0831_1, whole genome shotgun sequence (529010 bp)
Overview 1 RT 1: 378343-386859 bp Neighborhood of RT #1 [378343, 386859] CHASE3 CitA COG4251 aceE RVT-Retrons Feature: gene Location: 378343-380148 bp Ori: PBS20572.1 Feature: domain Description: CHASE3 Location: 378598-378859 bp Feature: domain Description: CHASE3 Location: 378598-378859 bp Feature: domain Description: CitA Location: 378871-379198 bp Feature: domain Description: CitA Location: 378871-379198 bp Feature: domain Description: COG4251 Location: 379405-380125 bp Feature: domain Description: COG42 51 Location: 379405-38012 5 bp Feature: gene Location: 380349-383039 bp Ori: PBS20573.1 Gene: aceE Feature: domain Description: aceE Location: 380373-383031 bp Feature: domain Description: aceE Location: 380373-383031 bp Feature: gene Location: 384211-385146 bp Ori: PBS20574.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 384319-384910 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 384319-384910 bp Feature: gene Location: 385802-386050 bp Feature: gene Location: 386521-386859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHASE3 (pfam05227), CitA (COG3290), COG4251 (Bacteriophytochrome (light-regulated signal transduction histidine kinase) ), aceE (TIGR00759), RVT-Retrons