myRT

myRT report for GCA_002325645.1_ASM232564v1

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Seq: DCSN01000206.1 TPA_asm: Pseudanabaena sp. UBA1465 UBA1465_contig_1824, whole genome shotgun sequence (38771 bp)
Overview 1 RT 1: 1-5818 bp Neighborhood of RT #1 [1, 5862] PRK05731 chlI RVT-UG14 NlpD birA_ligase Feature: gene Location: 1-1008 bp Feature: domain Description: PRK05731 Location: 7-973 bp Feature: domain Description: PRK05731 Location: 7-973 bp Feature: gene Location: 1057-2124 bp Feature: domain Description: chlI Location: 1084-2107 bp Feature: domain Description: chlI Location: 1 084-21 07 bp Feature: gene Location: 2408-3928 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 2825-3299 bp Feature: RT Description: RVT-UG1 4 Note: UG1 4 RT Location: 2825-3299 bp Feature: gene Location: 4100-5137 bp Feature: domain Description: NlpD Location: 4301-5066 bp Feature: domain Description: NlpD Location: 4301 -5066 bp Feature: gene Location: 5146-5862 bp Feature: domain Description: birA_ligase Location: 5161-5818 bp Feature: domain Description: birA_ligase Location: 51 61 -581 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05731 (thiamine monophosphate kinase; Provisional), chlI (CHL00081), RVT-UG14, NlpD (COG0739), birA_ligase (TIGR00121)

Seq: DCSN01000195.1 TPA_asm: Pseudanabaena sp. UBA1465 UBA1465_contig_944, whole genome shotgun sequence (42164 bp)
Overview 1 RT 1: 33522-39759 bp Neighborhood of RT #1 [33522, 39767] COG4249 YfmG Avd_like RVT-DGRs TldD Pentapeptide Pentapeptide Feature: gene Location: 33522-35735 bp Feature: domain Description: COG4249 Location: 33534-34248 bp Feature: domain Description: COG42 49 Location: 33534-342 48 bp Feature: domain Description: YfmG Location: 34791-35730 bp Feature: domain Description: YfmG Location: 34791-35730 bp Feature: gene Location: 35891-36238 bp Feature: domain Description: Avd_like Location: 35909-36218 bp Feature: domain Description: Avd_like Location: 35909-362 18 bp Feature: gene Location: 36437-37504 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36647-37289 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 36647-372 89 bp Feature: gene Location: 37983-39347 bp Feature: domain Description: TldD Location: 38013-39339 bp Feature: domain Description: TldD Location: 38013-39339 bp Feature: gene Location: 39384-39767 bp Feature: domain Description: Pentapeptide Location: 39477-39585 bp Feature: domain Description: Pentapeptide Location: 39477-39585 bp Feature: domain Description: Pentapeptide Location: 39684-39759 bp Feature: domain Description: Pentapeptide Location: 39684-39759 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4249 (Uncharacterized protein, contains caspase domain ), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, TldD (COG0312), Pentapeptide (pfam00805)