myRT

myRT report for GCA_002326265.1_ASM232626v1

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Seq: NQZP01000003.1 Pseudomonas aeruginosa strain S1h NODE_3_length_408076_cov_26.716, whole genome shotgun sequence (408076 bp)
Overview 1 RT 1: 2390-6078 bp Neighborhood of RT #1 [2390, 6078] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 2390-2974 bp Feature: domain Description: DUF1566 Location: 2636-2960 bp Feature: domain Description: DUF1 566 Location: 2636-2960 bp Feature: gene Location: 3013-3369 bp Feature: domain Description: Avd_like Location: 3040-3343 bp Feature: domain Description: Avd_like Location: 3040-3343 bp Feature: gene Location: 3642-4751 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3819-4503 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 381 9-4503 bp Feature: gene Location: 5157-5570 bp Feature: gene Location: 5875-6078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: NQZP01000020.1 Pseudomonas aeruginosa strain S1h NODE_20_length_114676_cov_25.0875, whole genome shotgun sequence (114676 bp)
Overview 1 RT 1: 75320-82130 bp Neighborhood of RT #1 [75320, 82327] ABC_phnC DUF772 RVT-GII GIIM CHD CHD Feature: gene Location: 75320-76147 bp Feature: domain Description: ABC_phnC Location: 75350-76064 bp Feature: domain Description: ABC_phnC Location: 75350-76064 bp Feature: gene Location: 76490-77000 bp Feature: domain Description: DUF772 Location: 76640-76835 bp Feature: domain Description: DUF772 Location: 76640-76835 bp Feature: gene Location: 77520-78788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77733-78390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 77733-78390 bp Feature: domain Description: GIIM Note: maturase Location: 78468-78690 bp Feature: domain Description: GIIM Note: maturase Location: 78468-78690 bp Feature: gene Location: 78938-79264 bp Feature: gene Location: 80783-82327 bp Feature: domain Description: CHD Location: 80999-81413 bp Feature: domain Description: CHD Location: 80999-81413 bp Feature: domain Description: CHD Location: 81641-82130 bp Feature: domain Description: CHD Location: 81641-82 130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ABC_phnC (TIGR02315), DUF772 (pfam05598), RVT-GII, GIIM (pfam08388), CHD (cd07302)

Seq: NQZP01000019.1 Pseudomonas aeruginosa strain S1h NODE_19_length_124171_cov_24.8209, whole genome shotgun sequence (124171 bp)
Overview 1 RT 1: 274-3088 bp Neighborhood of RT #1 [274, 3088] RVT-Retrons AAA_21 Feature: gene Location: 274-1230 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 391-946 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 91-946 bp Feature: gene Location: 1233-2558 bp Feature: domain Description: AAA_21 Location: 1314-1977 bp Feature: domain Description: AAA_21 Location: 13 14-1977 bp Feature: gene Location: 2822-3088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons