myRT

myRT report for GCA_002326825.1_ASM232682v1

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Seq: NTEX01000074.1 Escherichia coli strain KCJK5142 NODE_56_length_15709_cov_12.0337_ID_111, whole genome shotgun sequence (15709 bp)
Overview 1 RT 1: 4156-7966 bp Neighborhood of RT #1 [4156, 8031] AlpA PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4156-4362 bp Feature: domain Description: AlpA Location: 4183-4354 bp Feature: domain Description: AlpA Location: 41 83-4354 bp Feature: gene Location: 4856-5332 bp Feature: domain Description: PHA02517 Location: 4859-5324 bp Feature: domain Description: PHA0251 7 Location: 4859-5324 bp Feature: gene Location: 5413-6936 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5686-6418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5686-641 8 bp Feature: domain Description: GIIM Note: maturase Location: 6493-6691 bp Feature: domain Description: GIIM Note: maturase Location: 6493-6691 bp Feature: gene Location: 7230-7640 bp Feature: gene Location: 7528-8031 bp Feature: domain Description: PHA02517 Location: 7627-7966 bp Feature: domain Description: PHA0251 7 Location: 7627-7966 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)