myRT

myRT report for GCA_002327785.1_ASM232778v1

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Seq: DCUI01000057.1 TPA_asm: Phycisphaerales bacterium UBA2218 UBA2218_contig_12400, whole genome shotgun sequence (56153 bp)
Overview 1 RT 1: 41455-50229 bp Neighborhood of RT #1 [41455, 50234] RVT-Retrons addB_Gpos addA_Gpos Feature: gene Location: 41455-41688 bp Feature: gene Location: 41745-42086 bp Feature: gene Location: 42022-43020 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42214-42733 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4221 4-42733 bp Feature: gene Location: 43042-46506 bp Feature: domain Description: addB_Gpos Location: 43045-46456 bp Feature: domain Description: addB_Gpos Location: 43045-46456 bp Feature: gene Location: 46506-50234 bp Feature: domain Description: addA_Gpos Location: 46527-50229 bp Feature: domain Description: addA_Gpos Location: 46527-50229 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, addB_Gpos (TIGR02773), addA_Gpos (TIGR02785)

Seq: DCUI01000234.1 TPA_asm: Phycisphaerales bacterium UBA2218 UBA2218_contig_133616, whole genome shotgun sequence (4075 bp)
Overview 1 RT 1: 444-3996 bp Neighborhood of RT #1 [444, 4055] F5_F8_type_C esterase_phb RVT-GII Feature: gene Location: 444-812 bp Feature: gene Location: 866-3610 bp Feature: domain Description: F5_F8_type_C Location: 887-1091 bp Feature: domain Description: F5_F8_type_C Location: 887-1091 bp Feature: domain Description: esterase_phb Location: 2174-2537 bp Feature: domain Description: esterase_phb Location: 2 174-2 537 bp Feature: gene Location: 3891-4055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3894-3996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3894-3996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT F5_F8_type_C (pfam00754), esterase_phb (TIGR01840), RVT-GII

Seq: DCUI01000181.1 TPA_asm: Phycisphaerales bacterium UBA2218 UBA2218_contig_41570, whole genome shotgun sequence (95965 bp)
Overview 1 RT 1: 83750-90028 bp Neighborhood of RT #1 [83750, 90028] pfam03781 RVT-GII GIIM Feature: gene Location: 83750-84967 bp Feature: domain Description: pfam03781 Location: 84341-84938 bp Feature: domain Description: pfam03 781 Location: 843 41-8493 8 bp Feature: gene Location: 84964-86298 bp Feature: gene Location: 86463-87116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86475-86751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86475-86751 bp Feature: domain Description: GIIM Note: maturase Location: 86826-87036 bp Feature: domain Description: GIIM Note: maturase Location: 86826-8703 6 bp Feature: gene Location: 87375-87728 bp Feature: gene Location: 88466-90028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-GII, GIIM (pfam08388)

Seq: DCUI01000098.1 TPA_asm: Phycisphaerales bacterium UBA2218 UBA2218_contig_60482, whole genome shotgun sequence (2849 bp)
Overview 1 RT 1: 3-2848 bp Neighborhood of RT #1 [3, 2848] KOG1270 NfeD RVT-GII GIIM Feature: gene Location: 3-230 bp Feature: domain Description: KOG1270 Location: 111-228 bp Feature: domain Description: KOG1270 Location: 111-228 bp Feature: gene Location: 264-968 bp Feature: domain Description: NfeD Location: 600-933 bp Feature: domain Description: NfeD Location: 600-933 bp Feature: gene Location: 1251-2636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1605-2271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1605-2271 bp Feature: domain Description: GIIM Note: maturase Location: 2346-2556 bp Feature: domain Description: GIIM Note: maturase Location: 234 6-2556 bp Feature: gene Location: 2720-2848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1270 (KOG1270, Methyltransferases ), NfeD (pfam01957), RVT-GII, GIIM (pfam08388)

Seq: DCUI01000179.1 TPA_asm: Phycisphaerales bacterium UBA2218 UBA2218_contig_72619, whole genome shotgun sequence (21027 bp)
Overview 1 RT 1: 168-2961 bp Neighborhood of RT #1 [168, 2990] RVT-GII DUF1670 Feature: gene Location: 168-1520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 462-1149 bp Feature: gene Location: 2077-2214 bp Feature: gene Location: 2217-2990 bp Feature: domain Description: DUF1670 Location: 2304-2961 bp Feature: domain Description: DUF1670 Location: 2304-2961 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF1670 (pfam07900)