myRT

myRT report for GCA_002328755.1_ASM232875v1

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Seq: DCVV01000034.1 TPA_asm: Rhodocyclaceae bacterium UBA2179 UBA2179_contig_2646, whole genome shotgun sequence (3007 bp)
Overview 1 RT 1: 2-2486 bp Neighborhood of RT #1 [2, 2491] RVT-UG19 dnstrm_HI1420 upstrm_HI1419 Feature: gene Location: 2-1819 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 368-845 bp Feature: RT Description: RVT-UG1 9 Note: UG1 9 RT Location: 368-845 bp Feature: gene Location: 1885-2187 bp Feature: domain Description: dnstrm_HI1420 Location: 1897-2167 bp Feature: domain Description: dnstrm_HI1 420 Location: 1 897-21 67 bp Feature: gene Location: 2201-2491 bp Feature: domain Description: upstrm_HI1419 Location: 2213-2486 bp Feature: domain Description: upstrm_HI1 41 9 Location: 221 3-2486 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19, dnstrm_HI1420 (TIGR02684), upstrm_HI1419 (TIGR02683)

Seq: DCVV01000064.1 TPA_asm: Rhodocyclaceae bacterium UBA2179 UBA2179_contig_4177, whole genome shotgun sequence (38511 bp)
Overview 1 RT 1: 8102-12296 bp Neighborhood of RT #1 [8102, 12328] TmoB AAMH_A RVT-GII NcnH Feature: gene Location: 8102-8356 bp Feature: domain Description: TmoB Location: 8111-8351 bp Feature: domain Description: TmoB Location: 8111-8351 bp Feature: gene Location: 8477-9979 bp Feature: domain Description: AAMH_A Location: 8519-9920 bp Feature: domain Description: AAMH_A Location: 8519-992 0 bp Feature: gene Location: 10394-10690 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10403-10547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10403-10547 bp Feature: gene Location: 10836-11084 bp Feature: gene Location: 11132-12328 bp Feature: domain Description: NcnH Location: 11174-12296 bp Feature: domain Description: NcnH Location: 11174-12 2 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TmoB (pfam06234), AAMH_A (cd01057), RVT-GII, NcnH (cd01159)