myRT

myRT report for GCA_002330065.1_ASM233006v1

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Seq: NRFP01000008.1 Pseudomonas aeruginosa strain S1f NODE_8_length_188224_cov_13.2047, whole genome shotgun sequence (188224 bp)
Overview 1 RT 1: 29615-33303 bp Neighborhood of RT #1 [29615, 33303] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 29615-30199 bp Feature: domain Description: DUF1566 Location: 29861-30185 bp Feature: domain Description: DUF1 566 Location: 29861 -301 85 bp Feature: gene Location: 30238-30594 bp Feature: domain Description: Avd_like Location: 30265-30568 bp Feature: domain Description: Avd_like Location: 30265-30568 bp Feature: gene Location: 30867-31976 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31044-31728 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 31 044-31 728 bp Feature: gene Location: 32382-32795 bp Feature: gene Location: 33100-33303 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: NRFP01000029.1 Pseudomonas aeruginosa strain S1f NODE_29_length_85172_cov_11.1135, whole genome shotgun sequence (85172 bp)
Overview 1 RT 1: 32324-39248 bp Neighborhood of RT #1 [32324, 39331] CHD CHD RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 32324-33868 bp Feature: domain Description: CHD Location: 32540-32954 bp Feature: domain Description: CHD Location: 32 540-32 954 bp Feature: domain Description: CHD Location: 33182-33671 bp Feature: domain Description: CHD Location: 33182 -33671 bp Feature: gene Location: 35387-35713 bp Feature: gene Location: 35863-37131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36076-36733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36076-36733 bp Feature: domain Description: GIIM Note: maturase Location: 36811-37033 bp Feature: domain Description: GIIM Note: maturase Location: 36811-37033 bp Feature: gene Location: 37651-38161 bp Feature: domain Description: DUF772 Location: 37801-37996 bp Feature: domain Description: DUF772 Location: 37801-37996 bp Feature: gene Location: 38504-39331 bp Feature: domain Description: ABC_phnC Location: 38534-39248 bp Feature: domain Description: ABC_phnC Location: 38534-392 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)

Seq: NRFP01000065.1 Pseudomonas aeruginosa strain S1f NODE_65_length_16537_cov_8.98342, whole genome shotgun sequence (16537 bp)
Overview 1 RT 1: 13451-15981 bp Neighborhood of RT #1 [13451, 16265] AAA_21 RVT-Retrons Feature: gene Location: 13451-13717 bp Feature: gene Location: 13981-15306 bp Feature: domain Description: AAA_21 Location: 14062-14725 bp Feature: domain Description: AAA_21 Location: 14062-14725 bp Feature: gene Location: 15309-16265 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15426-15981 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15426-15981 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_21 (pfam13304), RVT-Retrons