myRT

myRT report for GCA_002331645.1_ASM233164v1

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Seq: DCZQ01000015.1 TPA_asm: Pseudomonas stutzeri isolate UBA2080 UBA2080_contig_134, whole genome shotgun sequence (16452 bp)
Overview 1 RT 1: 13003-16370 bp Neighborhood of RT #1 [13003, 16370] Tag PRK00529 RVT-GII GIIM HNHc Feature: gene Location: 13003-13788 bp Feature: domain Description: Tag Location: 13144-13759 bp Feature: domain Description: Tag Location: 1 31 44-1 3759 bp Feature: gene Location: 13862-14428 bp Feature: domain Description: PRK00529 Location: 13865-14423 bp Feature: domain Description: PRK00529 Location: 1 3865-1 4423 bp Feature: gene Location: 14862-16049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14871-15006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4871 -1 5006 bp Feature: domain Description: GIIM Note: maturase Location: 15402-15591 bp Feature: domain Description: GIIM Note: maturase Location: 1 5402-1 5591 bp Feature: domain Description: HNHc Note: nucleases Location: 15819-15975 bp Feature: domain Description: HNHc Note: nucleases Location: 1 581 9-1 5975 bp Feature: gene Location: 15933-16370 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tag (COG2818), PRK00529 (elongation factor P; Validated), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: DCZQ01000025.1 TPA_asm: Pseudomonas stutzeri isolate UBA2080 UBA2080_contig_25, whole genome shotgun sequence (76995 bp)
Overview 1 RT 1: 37763-43909 bp Neighborhood of RT #1 [37763, 43935] RVT-GII Autotransporter MhpC MhpC Feature: gene Location: 37763-38308 bp Feature: gene Location: 38544-38708 bp Feature: gene Location: 38976-39701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38979-39270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38979-392 70 bp Feature: gene Location: 40184-43081 bp Feature: domain Description: Autotransporter Location: 42284-43019 bp Feature: domain Description: Autotransporter Location: 42 2 84-43019 bp Feature: gene Location: 43135-43935 bp Feature: domain Description: MhpC Location: 43342-43636 bp Feature: domain Description: MhpC Location: 43342 -43636 bp Feature: domain Description: MhpC Location: 43699-43909 bp Feature: domain Description: MhpC Location: 43699-43909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Autotransporter (smart00869), MhpC (COG0596)