myRT

myRT report for GCA_002332205.1_ASM233220v1

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Seq: NRGZ01000002.1 Pseudoalteromonas sp. JB197 SAMN07141177.102, whole genome shotgun sequence (743290 bp)
Overview 1 RT 1: 423286-428194 bp 2 RT 2: 539709-544108 bp Neighborhood of RT #1 [423286, 428194] Zn_Tnp_IS91 RVT-GII GIIM SSL2 Neighborhood of RT #2 [539709, 544113] YcjR COG3547 RVT-GII PRK10537 Feature: gene Location: 423286-423971 bp Feature: domain Description: Zn_Tnp_IS91 Location: 423313-423478 bp Feature: domain Description: Zn_Tnp_IS91 Location: 42331 3-423478 bp Feature: gene Location: 424378-424788 bp Feature: gene Location: 424871-425908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424874-425471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 424874-425471 bp Feature: domain Description: GIIM Note: maturase Location: 425510-425729 bp Feature: domain Description: GIIM Note: maturase Location: 42551 0-425729 bp Feature: gene Location: 426228-427616 bp Feature: domain Description: SSL2 Location: 426234-427350 bp Feature: domain Description: SSL2 Location: 426234-427350 bp Feature: gene Location: 427610-428194 bp Feature: gene Location: 539709-540563 bp Feature: domain Description: YcjR Location: 539817-540552 bp Feature: domain Description: YcjR Location: 53981 7-540552 bp Feature: gene Location: 540905-541402 bp Feature: domain Description: COG3547 Location: 540923-541367 bp Feature: domain Description: COG3547 Location: 540923-541 367 bp Feature: gene Location: 541337-542026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541550-541988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 550-541 988 bp Feature: gene Location: 542598-542788 bp Feature: gene Location: 542938-544113 bp Feature: domain Description: PRK10537 Location: 542956-544108 bp Feature: domain Description: PRK1 0537 Location: 542956-5441 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Zn_Tnp_IS91 (pfam14319), RVT-GII, GIIM (pfam08388), SSL2 (COG1061), YcjR (COG1082), COG3547 (Transposase ), PRK10537 (voltage-gated potassium channel protein)

Seq: NRGZ01000001.1 Pseudoalteromonas sp. JB197 SAMN07141177.101, whole genome shotgun sequence (3277462 bp)
Overview 1 RT 1: 778337-782281 bp 2 RT 2: 1136320-1142080 bp 3 RT 3: 1267289-1271461 bp 4 RT 4: 1612693-1616903 bp Neighborhood of RT #1 [778337, 782352] InsE PHA02517 RVT-GII GIIM PHA02517 PhdYeFM_antitox Neighborhood of RT #2 [1136320, 1142080] PHP_HisPPase AAA ABC_Iron-Siderophores_B12_Hemin RVT-GII GIIM Neighborhood of RT #3 [1267289, 1271461] RVT-GII GIIM 45_DOPA_Dioxygenase Neighborhood of RT #4 [1612693, 1616908] InsE PHA02517 RVT-GII GIIM PHA02517 cas1_ECOLI Feature: gene Location: 778337-778645 bp Feature: domain Description: InsE Location: 778340-778634 bp Feature: domain Description: InsE Location: 778340-778634 bp Feature: gene Location: 778672-779055 bp Feature: domain Description: PHA02517 Location: 778699-779032 bp Feature: domain Description: PHA02 517 Location: 778699-779032 bp Feature: gene Location: 779695-781218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779968-780700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 779968-780700 bp Feature: domain Description: GIIM Note: maturase Location: 780772-780973 bp Feature: domain Description: GIIM Note: maturase Location: 780772 -780973 bp Feature: gene Location: 781323-781775 bp Feature: domain Description: PHA02517 Location: 781326-781749 bp Feature: domain Description: PHA02 517 Location: 78132 6-781749 bp Feature: gene Location: 782071-782352 bp Feature: domain Description: PhdYeFM_antitox Location: 782101-782281 bp Feature: domain Description: PhdYeFM_antitox Location: 782 101-782 2 81 bp Feature: gene Location: 1136320-1138464 bp Feature: domain Description: PHP_HisPPase Location: 1136329-1136686 bp Feature: domain Description: PHP_HisPPase Location: 113632 9-1136686 bp Feature: domain Description: AAA Location: 1137079-1137547 bp Feature: domain Description: AAA Location: 1137079-1137547 bp Feature: domain Description: ABC_Iron-Siderophores_B12_Hemin Location: 1138075-1138267 bp Feature: domain Description: ABC_Iron-Siderophores_B12 _Hemin Location: 1138075-11382 67 bp Feature: gene Location: 1138472-1138753 bp Feature: gene Location: 1138822-1140075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139014-1139638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1139014-1139638 bp Feature: domain Description: GIIM Note: maturase Location: 1139677-1139896 bp Feature: domain Description: GIIM Note: maturase Location: 1139677-1139896 bp Feature: gene Location: 1140851-1141492 bp Feature: gene Location: 1141526-1142080 bp Feature: gene Location: 1267289-1267603 bp Feature: gene Location: 1267619-1267825 bp Feature: gene Location: 1267906-1269159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1268098-1268722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 68098-12 6872 2 bp Feature: domain Description: GIIM Note: maturase Location: 1268761-1268980 bp Feature: domain Description: GIIM Note: maturase Location: 12 68761-12 68980 bp Feature: gene Location: 1269922-1270722 bp Feature: domain Description: 45_DOPA_Dioxygenase Location: 1269943-1270687 bp Feature: domain Description: 45_DOPA_Dioxygenase Location: 12 69943-12 70687 bp Feature: gene Location: 1270799-1271461 bp Feature: gene Location: 1612693-1613004 bp Feature: domain Description: InsE Location: 1612711-1612990 bp Feature: domain Description: InsE Location: 1612 711-1612 990 bp Feature: gene Location: 1613004-1613417 bp Feature: domain Description: PHA02517 Location: 1613067-1613394 bp Feature: domain Description: PHA02 517 Location: 1613067-1613394 bp Feature: gene Location: 1614057-1615580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614330-1615062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1614330-1615062 bp Feature: domain Description: GIIM Note: maturase Location: 1615134-1615335 bp Feature: domain Description: GIIM Note: maturase Location: 1615134-1615335 bp Feature: gene Location: 1615643-1616128 bp Feature: domain Description: PHA02517 Location: 1615664-1616102 bp Feature: domain Description: PHA02 517 Location: 1615664-1616102 bp Feature: gene Location: 1616153-1616908 bp Feature: domain Description: cas1_ECOLI Location: 1616174-1616903 bp Feature: domain Description: cas1_ECOLI Location: 1616174-1616903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PhdYeFM_antitox (pfam02604), PHP_HisPPase (cd07432), AAA (TIGR00769), ABC_Iron-Siderophores_B12_Hemin (cd03214), 45_DOPA_Dioxygenase (cd07363), cas1_ECOLI (TIGR03638)