myRT

myRT report for GCA_002332395.1_ASM233239v1

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Seq: NRGP01000044.1 Brevibacterium aurantiacum strain 947_7 SAMN07141155.150, whole genome shotgun sequence (3940 bp)
Overview 1 RT 1: 81-3043 bp Neighborhood of RT #1 [81, 3072] RVT-GII GIIM PHA02517 xerC xerC Feature: gene Location: 81-1514 bp Ori: PCC44903.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 402-1 089 bp Feature: domain Description: GIIM Note: maturase Location: 1164-1389 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 64-1 389 bp Feature: gene Location: 1622-1882 bp Feature: domain Description: PHA02517 Location: 1637-1880 bp Feature: domain Description: PHA0251 7 Location: 1 637-1 880 bp Feature: gene Location: 1984-3072 bp Ori: PCC44905.1 Feature: domain Description: xerC Location: 2065-2392 bp Feature: domain Description: xerC Location: 2065-2392 bp Feature: domain Description: xerC Location: 2494-3043 bp Feature: domain Description: xerC Location: 2494-3043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), xerC (PRK01287)

Seq: NRGP01000002.1 Brevibacterium aurantiacum strain 947_7 SAMN07141155.103, whole genome shotgun sequence (378605 bp)
Overview 1 RT 1: 35267-41768 bp Neighborhood of RT #1 [35267, 41782] COG4584 IstB_IS21 RVT-UG22 mesacon_CoA_iso HTD2 Feature: gene Location: 35267-36877 bp Ori: PCC48163.1 Feature: domain Description: COG4584 Location: 35570-36161 bp Feature: domain Description: COG4584 Location: 35570-36161 bp Feature: gene Location: 36891-37661 bp Ori: PCC48164.1 Feature: domain Description: IstB_IS21 Location: 37065-37596 bp Feature: domain Description: IstB_IS2 1 Location: 37065-37596 bp Feature: gene Location: 37881-39371 bp Ori: PCC48165.1 Feature: RT Description: RVT-UG22 Note: UG22 RT Location: 38097-38613 bp Feature: RT Description: RVT-UG2 2 Note: UG2 2 RT Location: 38097-38613 bp Feature: gene Location: 39707-40903 bp Ori: PCC48166.1 Feature: domain Description: mesacon_CoA_iso Location: 39734-40874 bp Feature: domain Description: mesacon_CoA_iso Location: 39734-40874 bp Feature: gene Location: 40913-41782 bp Ori: PCC48167.1 Feature: domain Description: HTD2 Location: 40916-41768 bp Feature: domain Description: HTD2 Location: 40916-41768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), IstB_IS21 (pfam01695), RVT-UG22, mesacon_CoA_iso (TIGR04253), HTD2 (COG3777)