myRT

myRT report for GCA_002332515.1_ASM233251v1

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Seq: DCZY01000221.1 TPA_asm: Paenibacillus sp. UBA2072 UBA2072_contig_159, whole genome shotgun sequence (6365 bp)
Overview 1 RT 1: 2666-6113 bp Neighborhood of RT #1 [2666, 6280] GH43_C2 Glyco_hydro_10 RVT-GII GIIM Feature: gene Location: 2666-3304 bp Feature: domain Description: GH43_C2 Location: 2708-3296 bp Feature: domain Description: GH43_C2 Location: 2708-3296 bp Feature: gene Location: 3350-4360 bp Feature: domain Description: Glyco_hydro_10 Location: 3383-4346 bp Feature: domain Description: Glyco_hydro_1 0 Location: 3383-4346 bp Feature: gene Location: 4889-6280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5201-5828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5201 -5828 bp Feature: domain Description: GIIM Note: maturase Location: 5885-6113 bp Feature: domain Description: GIIM Note: maturase Location: 5885-61 1 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GH43_C2 (pfam17851), Glyco_hydro_10 (pfam00331), RVT-GII, GIIM (pfam08388)

Seq: DCZY01000222.1 TPA_asm: Paenibacillus sp. UBA2072 UBA2072_contig_55, whole genome shotgun sequence (24184 bp)
Overview 1 RT 1: 20613-24037 bp Neighborhood of RT #1 [20613, 24037] SkfB RVT-GII GIIM Feature: gene Location: 20613-21485 bp Feature: domain Description: SkfB Location: 20649-20898 bp Feature: domain Description: SkfB Location: 2 0649-2 0898 bp Feature: gene Location: 21842-21976 bp Feature: gene Location: 22358-23758 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22670-23297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 670-2 32 97 bp Feature: domain Description: GIIM Note: maturase Location: 23354-23582 bp Feature: domain Description: GIIM Note: maturase Location: 2 3354-2 3582 bp Feature: gene Location: 23576-24037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SkfB (COG0535), RVT-GII, GIIM (pfam08388)

Seq: DCZY01000062.1 TPA_asm: Paenibacillus sp. UBA2072 UBA2072_contig_733, whole genome shotgun sequence (13683 bp)
Overview 1 RT 1: 8394-13364 bp Neighborhood of RT #1 [8394, 13364] Enpp RVT-GII GIIM HTH_17 Feature: gene Location: 8394-9710 bp Feature: domain Description: Enpp Location: 8430-9645 bp Feature: domain Description: Enpp Location: 843 0-9645 bp Feature: gene Location: 9930-10070 bp Feature: gene Location: 10206-11597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10548-11166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10548-11166 bp Feature: domain Description: GIIM Note: maturase Location: 11217-11430 bp Feature: domain Description: GIIM Note: maturase Location: 11217-1143 0 bp Feature: gene Location: 12036-12380 bp Feature: domain Description: HTH_17 Location: 12177-12360 bp Feature: domain Description: HTH_17 Location: 12177-123 60 bp Feature: gene Location: 12732-13364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HTH_17 (pfam12728), Enpp (cd16018)