myRT

myRT report for GCA_002334505.1_ASM233450v1

Download annotations/find similar RTs

Seq: BEGC01000004.1 Enterobacter hormaechei subsp. steigerwaltii DNA, contig: sequence004, strain: TUM11057, whole genome shotgun sequence (11574 bp)
Overview 1 RT 1: 7839-11572 bp Neighborhood of RT #1 [7839, 11571] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 7839-8159 bp Feature: gene Location: 8771-9196 bp Feature: domain Description: PHA02517 Location: 8792-9131 bp Feature: domain Description: PHA0251 7 Location: 8792-91 31 bp Feature: gene Location: 9791-11314 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10064-10796 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0064-1 0796 bp Feature: domain Description: GIIM Note: maturase Location: 10871-11069 bp Feature: domain Description: GIIM Note: maturase Location: 1 0871 -1 1 069 bp Feature: gene Location: 11437-11571 bp Feature: domain Description: PHA02517 Location: 11440-11572 bp Feature: domain Description: PHA0251 7 Location: 1 1 440-1 1 572 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: BEGC01000065.1 Enterobacter hormaechei subsp. steigerwaltii DNA, contig: sequence065, strain: TUM11057, whole genome shotgun sequence (16141 bp)
Overview 1 RT 1: 14023-15636 bp Neighborhood of RT #1 [14023, 16115] PRK09678 RVT-UG3 Feature: gene Location: 14023-14169 bp Feature: gene Location: 14172-14390 bp Feature: domain Description: PRK09678 Location: 14175-14364 bp Feature: domain Description: PRK09678 Location: 14175-14364 bp Feature: gene Location: 14853-16115 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 15138-15636 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 15138-15636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3

Seq: BEGC01000193.1 Enterobacter hormaechei subsp. steigerwaltii DNA, contig: sequence193, strain: TUM11057, whole genome shotgun sequence (1824 bp)
Overview 1 RT 1: 2-914 bp Neighborhood of RT #1 [2, 1822] RVT-UG8 Feature: gene Location: 2-1822 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 458-914 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 458-914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8