myRT

myRT report for GCA_002335295.1_ASM233529v1

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Seq: DDCM01000221.1 TPA_asm: Agrobacterium tumefaciens isolate UBA2006 UBA2006_contig_631, whole genome shotgun sequence (23028 bp)
Overview 1 RT 1: 3976-7180 bp Neighborhood of RT #1 [3976, 7212] Tra5 RVT-GII GIIM PHA02517 Feature: gene Location: 3976-4128 bp Feature: gene Location: 4133-4513 bp Feature: domain Description: Tra5 Location: 4145-4502 bp Feature: domain Description: Tra5 Location: 41 45-4502 bp Feature: gene Location: 4662-6191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4935-5670 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4935-5670 bp Feature: domain Description: GIIM Note: maturase Location: 5742-5970 bp Feature: domain Description: GIIM Note: maturase Location: 5742-5970 bp Feature: gene Location: 6220-6534 bp Feature: gene Location: 6811-7212 bp Feature: domain Description: PHA02517 Location: 6916-7180 bp Feature: domain Description: PHA0251 7 Location: 691 6-71 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)