myRT

myRT report for GCA_002335745.1_ASM233574v1

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Seq: NIST01000001.1 Bacillus sp. FJAT-44876 Scaffold1, whole genome shotgun sequence (5511341 bp)
Overview 1 RT 1: 602308-610357 bp 2 RT 2: 883364-888077 bp 3 RT 3: 1038511-1044980 bp 4 RT 4: 1334584-1339370 bp 5 RT 5: 1347300-1353689 bp 6 RT 6: 1408872-1413602 bp 7 RT 7: 1419918-1423266 bp 8 RT 8: 1485408-1489544 bp 9 RT 9: 1496590-1501982 bp 10 RT 10: 1548874-1554010 bp 11 RT 11: 1561951-1565942 bp 12 RT 12: 1760171-1765114 bp 13 RT 13: 1963951-1968653 bp 14 RT 14: 2082733-2088345 bp 15 RT 15: 2103591-2109757 bp 16 RT 16: 2140215-2144949 bp 17 RT 17: 2408089-2413908 bp 18 RT 18: 2694099-2699630 bp 19 RT 19: 2750579-2756523 bp 20 RT 20: 3131437-3137575 bp 21 RT 21: 3221043-3227554 bp 22 RT 22: 3387196-3391302 bp 23 RT 23: 3577479-3581789 bp 24 RT 24: 4157485-4162455 bp 25 RT 25: 4382699-4389256 bp 26 RT 26: 4523835-4535423 bp 27 RT 27: 4848469-4858592 bp 28 RT 28: 5047716-5052209 bp 29 RT 29: 5057861-5064336 bp 30 RT 30: 5220811-5230631 bp 31 RT 31: 5233741-5240403 bp Neighborhood of RT #1 [602308, 610357] gyrB PRK05560 RVT-GII GIIM HDGYP Neighborhood of RT #2 [883364, 888077] DUF2971 RVT-GII GIIM LVIVD LVIVD LVIVD Neighborhood of RT #3 [1038511, 1044988] MtlA RVT-GII GIIM BglG PTS_EIIA_2 MtlA2 Neighborhood of RT #4 [1334584, 1339378] MarR MATE_MepA_like RVT-GII GIIM YhcF Neighborhood of RT #5 [1347300, 1353697] GlpA YjcZ_2 RVT-GII GIIM PRK12554 NagC Neighborhood of RT #6 [1408872, 1413748] CoxIIa PotA RVT-GII GIIM GlpG Neighborhood of RT #7 [1419918, 1423295] RVT-GII GIIM Rsbr_N STAS_RsbR_RsbS_like STAS_RsbR_RsbS_like Neighborhood of RT #8 [1485408, 1489945] INT_ICEBs1_C_like RVT-GII GIIM Arm-DNA-bind_4 Phage_int_SAM_3 INT_ICEBs1_C_like HTH_26 Neighborhood of RT #9 [1496590, 1502446] Saf_2TM SAVED RVT-UG7 Hypoth_Ymh AlbA_2 Neighborhood of RT #10 [1548874, 1554015] DinB_2 BVR-B_like_SDR_a RVT-GII GIIM PBP2_OpuAC_like GbsR Neighborhood of RT #11 [1561951, 1565965] RVT-GII GIIM CobA_CobO_BtuR PRK01077 Neighborhood of RT #12 [1760171, 1765114] COG4637 COG4637 TOPRIM_OLD RVT-Retrons Neighborhood of RT #13 [1963951, 1968658] RVT-GII RVT-GII GIIM Smc XylF Neighborhood of RT #14 [2082733, 2088350] RutF RVT-GII GIIM SUF_scaf_2 YejR Neighborhood of RT #15 [2103591, 2109774] COG1233 COG1233 ED_TypeI_classII_C ED_TypeI_classII_C RVT-GII GIIM FadR MhpC Neighborhood of RT #16 [2140215, 2144951] RVT-GII GIIM BetT HTH_ARAC YdeE Neighborhood of RT #17 [2408089, 2413922] MhpC BKR_SDR_c RVT-GII GIIM ALDH_YwdH-P39616 Neighborhood of RT #18 [2694099, 2699644] COG4603 YufQ RVT-GII GIIM DUF2225 CheX Neighborhood of RT #19 [2750579, 2756597] STAS_RsbR_RsbS_like spore_safA spore_YkwD RVT-GII GIIM R_switched_YkoY Acetyltransf_1 Neighborhood of RT #20 [3131437, 3137724] DUF3137 DUF3137 LemA RVT-GII GIIM COG4825 DPM_DPG-synthase_like Neighborhood of RT #21 [3221043, 3227568] SpoVAE GerA RVT-GII GIIM lysA PpiB Neighborhood of RT #22 [3387196, 3391302] DUF772 DDE_Tnp_1_6 RVT-GII GIIM Neighborhood of RT #23 [3577479, 3581848] AmpC RVT-GII RVT-GII GIIM KOG3139 Nudix_Hydrolase Neighborhood of RT #24 [4157485, 4162475] RimL RVT-GII GIIM leuD Neighborhood of RT #25 [4382699, 4389267] RVT-GII GIIM GAF GGDEF FolC Neighborhood of RT #26 [4523835, 4535449] PRK09776 PRK10060 DDE_Tnp_1 RVT-GII GIIM thrS DUF4267 Neighborhood of RT #27 [4848469, 4858597] Tar GadA RVT-GII GIIM MFS_OFA_like PRK04319 Neighborhood of RT #28 [5047716, 5052211] YurZ RVT-GII GIIM PBP2_lipoprotein_Tp32 MetP Neighborhood of RT #29 [5057861, 5064338] YhaK RVT-GII GIIM VLCAD PRK07661 Neighborhood of RT #30 [5220811, 5230631] uvrA PRK05298 RVT-GII GIIM PDZ_serine_protease Neighborhood of RT #31 [5233741, 5240408] DDE_Tnp_1_6 prc PG_binding_1 RVT-GII GIIM RVT-GII CwlO1 Peptidase_M23 FtsX Feature: gene Location: 602308-604221 bp Feature: domain Description: gyrB Location: 602320-604219 bp Feature: domain Description: gyrB Location: 602320-60421 9 bp Feature: gene Location: 604416-606971 bp Feature: domain Description: PRK05560 Location: 604434-606831 bp Feature: domain Description: PRK05560 Location: 604434-606831 bp Feature: gene Location: 607318-607824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607321-607462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 607321 -607462 bp Feature: domain Description: GIIM Note: maturase Location: 607543-607774 bp Feature: domain Description: GIIM Note: maturase Location: 607543-607774 bp Feature: gene Location: 608259-609344 bp Feature: domain Description: HDGYP Location: 608409-609273 bp Feature: domain Description: HDGYP Location: 608409-609273 bp Feature: gene Location: 610229-610357 bp Feature: gene Location: 883364-884185 bp Feature: domain Description: DUF2971 Location: 883556-883895 bp Feature: domain Description: DUF2971 Location: 883556-883895 bp Feature: gene Location: 884213-884470 bp Feature: gene Location: 885122-886228 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885341-885968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885341 -885968 bp Feature: domain Description: GIIM Note: maturase Location: 886013-886211 bp Feature: domain Description: GIIM Note: maturase Location: 88601 3-88621 1 bp Feature: gene Location: 886433-887860 bp Feature: domain Description: LVIVD Location: 886640-887000 bp Feature: domain Description: LVIVD Location: 886640-887000 bp Feature: domain Description: LVIVD Location: 887099-887390 bp Feature: domain Description: LVIVD Location: 887099-887390 bp Feature: domain Description: LVIVD Location: 887501-887801 bp Feature: domain Description: LVIVD Location: 887501 -887801 bp Feature: gene Location: 887877-888077 bp Feature: gene Location: 1038511-1039950 bp Feature: domain Description: MtlA Location: 1038535-1039948 bp Feature: domain Description: MtlA Location: 1 038535-1 039948 bp Feature: gene Location: 1040501-1040629 bp Feature: gene Location: 1040698-1041969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1040917-1041544 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 04091 7-1 041 544 bp Feature: domain Description: GIIM Note: maturase Location: 1041589-1041817 bp Feature: domain Description: GIIM Note: maturase Location: 1 041 589-1 041 81 7 bp Feature: gene Location: 1042380-1044554 bp Feature: domain Description: BglG Location: 1042449-1043994 bp Feature: domain Description: BglG Location: 1 042449-1 043994 bp Feature: domain Description: PTS_EIIA_2 Location: 1044063-1044501 bp Feature: domain Description: PTS_EIIA_2 Location: 1 044063-1 044501 bp Feature: gene Location: 1044551-1044988 bp Feature: domain Description: MtlA2 Location: 1044569-1044980 bp Feature: domain Description: MtlA2 Location: 1 044569-1 044980 bp Feature: gene Location: 1334584-1335021 bp Feature: domain Description: MarR Location: 1334641-1335010 bp Feature: domain Description: MarR Location: 1 334641 -1 33501 0 bp Feature: gene Location: 1335052-1336440 bp Feature: domain Description: MATE_MepA_like Location: 1335094-1336369 bp Feature: domain Description: MATE_MepA_like Location: 1 335094-1 336369 bp Feature: gene Location: 1337050-1338309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1337245-1337863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 337245-1 337863 bp Feature: domain Description: GIIM Note: maturase Location: 1337914-1338145 bp Feature: domain Description: GIIM Note: maturase Location: 1 33791 4-1 3381 45 bp Feature: gene Location: 1338483-1338653 bp Feature: gene Location: 1339004-1339378 bp Feature: domain Description: YhcF Location: 1339016-1339370 bp Feature: domain Description: YhcF Location: 1 33901 6-1 339370 bp Feature: gene Location: 1347300-1348997 bp Feature: domain Description: GlpA Location: 1347342-1348923 bp Feature: domain Description: GlpA Location: 1 347342-1 348923 bp Feature: gene Location: 1349246-1349377 bp Feature: domain Description: YjcZ_2 Location: 1349315-1349366 bp Feature: domain Description: YjcZ_2 Location: 1 34931 5-1 349366 bp Feature: gene Location: 1350014-1351273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1350209-1350827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 350209-1 350827 bp Feature: domain Description: GIIM Note: maturase Location: 1350878-1351109 bp Feature: domain Description: GIIM Note: maturase Location: 1 350878-1 351 1 09 bp Feature: gene Location: 1351851-1352669 bp Feature: domain Description: PRK12554 Location: 1351875-1352664 bp Feature: domain Description: PRK1 2554 Location: 1 351 875-1 352664 bp Feature: gene Location: 1352804-1353697 bp Feature: domain Description: NagC Location: 1352813-1353689 bp Feature: domain Description: NagC Location: 1 35281 3-1 353689 bp Feature: gene Location: 1408872-1409015 bp Feature: domain Description: CoxIIa Location: 1408929-1409010 bp Feature: domain Description: CoxIIa Location: 1 408929-1 40901 0 bp Feature: gene Location: 1409479-1410537 bp Feature: domain Description: PotA Location: 1409485-1410511 bp Feature: domain Description: PotA Location: 1 409485-1 41 051 1 bp Feature: gene Location: 1411130-1412389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1411325-1411943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 41 1 325-1 41 1 943 bp Feature: domain Description: GIIM Note: maturase Location: 1411994-1412225 bp Feature: domain Description: GIIM Note: maturase Location: 1 41 1 994-1 41 2225 bp Feature: gene Location: 1412470-1412751 bp Feature: gene Location: 1412999-1413748 bp Feature: domain Description: GlpG Location: 1413014-1413602 bp Feature: domain Description: GlpG Location: 1 41 301 4-1 41 3602 bp Feature: gene Location: 1419918-1420100 bp Feature: gene Location: 1420221-1420376 bp Feature: gene Location: 1420636-1421802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1420858-1421479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 420858-1 421 479 bp Feature: domain Description: GIIM Note: maturase Location: 1421521-1421743 bp Feature: domain Description: GIIM Note: maturase Location: 1 421 521 -1 421 743 bp Feature: gene Location: 1422099-1422923 bp Feature: domain Description: Rsbr_N Location: 1422126-1422507 bp Feature: domain Description: Rsbr_N Location: 1 4221 26-1 422507 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 1422549-1422873 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 1 422549-1 422873 bp Feature: gene Location: 1422939-1423295 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 1422948-1423266 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 1 422948-1 423266 bp Feature: gene Location: 1485408-1486223 bp Feature: gene Location: 1486233-1486589 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1486251-1486506 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 486251 -1 486506 bp Feature: gene Location: 1487128-1488387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1487323-1487941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 487323-1 487941 bp Feature: domain Description: GIIM Note: maturase Location: 1487992-1488223 bp Feature: domain Description: GIIM Note: maturase Location: 1 487992-1 488223 bp Feature: gene Location: 1488440-1489318 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1488482-1488602 bp Feature: domain Description: Arm-DNA-bind_4 Location: 1 488482-1 488602 bp Feature: domain Description: Phage_int_SAM_3 Location: 1488641-1488809 bp Feature: domain Description: Phage_int_SAM_3 Location: 1 488641 -1 488809 bp Feature: domain Description: INT_ICEBs1_C_like Location: 1488998-1489301 bp Feature: domain Description: INT_ICEBs1 _C_like Location: 1 488998-1 489301 bp Feature: gene Location: 1489346-1489945 bp Feature: domain Description: HTH_26 Location: 1489367-1489544 bp Feature: domain Description: HTH_26 Location: 1 489367-1 489544 bp Feature: gene Location: 1496590-1497699 bp Feature: domain Description: Saf_2TM Location: 1496731-1496887 bp Feature: domain Description: Saf_2TM Location: 1 496731 -1 496887 bp Feature: domain Description: SAVED Location: 1497067-1497616 bp Feature: domain Description: SAVED Location: 1 497067-1 49761 6 bp Feature: gene Location: 1497872-1498564 bp Feature: gene Location: 1498836-1500428 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1499301-1499688 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 499301 -1 499688 bp Feature: gene Location: 1500612-1501412 bp Feature: domain Description: Hypoth_Ymh Location: 1501038-1501398 bp Feature: domain Description: Hypoth_Ymh Location: 1 501 038-1 501 398 bp Feature: gene Location: 1501559-1502446 bp Feature: domain Description: AlbA_2 Location: 1501610-1501982 bp Feature: domain Description: AlbA_2 Location: 1 501 61 0-1 501 982 bp Feature: gene Location: 1548874-1549419 bp Feature: domain Description: DinB_2 Location: 1548967-1549393 bp Feature: domain Description: DinB_2 Location: 1 548967-1 549393 bp Feature: gene Location: 1549725-1550345 bp Feature: domain Description: BVR-B_like_SDR_a Location: 1549731-1550337 bp Feature: domain Description: BVR-B_like_SDR_a Location: 1 549731 -1 550337 bp Feature: gene Location: 1551039-1552298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1551234-1551852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 551 234-1 551 852 bp Feature: domain Description: GIIM Note: maturase Location: 1551903-1552134 bp Feature: domain Description: GIIM Note: maturase Location: 1 551 903-1 5521 34 bp Feature: gene Location: 1552401-1553288 bp Feature: domain Description: PBP2_OpuAC_like Location: 1552527-1553286 bp Feature: domain Description: PBP2_OpuAC_like Location: 1 552527-1 553286 bp Feature: gene Location: 1553464-1554015 bp Feature: domain Description: GbsR Location: 1553497-1554010 bp Feature: domain Description: GbsR Location: 1 553497-1 55401 0 bp Feature: gene Location: 1561951-1562133 bp Feature: gene Location: 1562254-1562409 bp Feature: gene Location: 1562669-1563835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1562891-1563512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 562891 -1 56351 2 bp Feature: domain Description: GIIM Note: maturase Location: 1563554-1563776 bp Feature: domain Description: GIIM Note: maturase Location: 1 563554-1 563776 bp Feature: gene Location: 1564009-1564560 bp Feature: domain Description: CobA_CobO_BtuR Location: 1564036-1564558 bp Feature: domain Description: CobA_CobO_BtuR Location: 1 564036-1 564558 bp Feature: gene Location: 1564583-1565965 bp Feature: domain Description: PRK01077 Location: 1564592-1565942 bp Feature: domain Description: PRK01 077 Location: 1 564592-1 565942 bp Feature: gene Location: 1760171-1760431 bp Feature: gene Location: 1760642-1762633 bp Feature: domain Description: COG4637 Location: 1760645-1760795 bp Feature: domain Description: COG4637 Location: 1 760645-1 760795 bp Feature: domain Description: COG4637 Location: 1761422-1761614 bp Feature: domain Description: COG4637 Location: 1 761 422-1 761 61 4 bp Feature: domain Description: TOPRIM_OLD Location: 1761734-1761938 bp Feature: domain Description: TOPRIM_OLD Location: 1 761 734-1 761 938 bp Feature: gene Location: 1762877-1763881 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1762997-1763561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 762997-1 763561 bp Feature: gene Location: 1763890-1764213 bp Feature: gene Location: 1764410-1765114 bp Feature: gene Location: 1963951-1964664 bp Feature: gene Location: 1965269-1965493 bp Feature: gene Location: 1965505-1965696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1965511-1965694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 96551 1 -1 965694 bp Feature: gene Location: 1965715-1966527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1965718-1966081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 96571 8-1 966081 bp Feature: domain Description: GIIM Note: maturase Location: 1966132-1966363 bp Feature: domain Description: GIIM Note: maturase Location: 1 9661 32-1 966363 bp Feature: gene Location: 1966630-1967184 bp Feature: domain Description: Smc Location: 1966636-1967137 bp Feature: domain Description: Smc Location: 1 966636-1 9671 37 bp Feature: gene Location: 1967567-1968658 bp Feature: domain Description: XylF Location: 1967615-1968653 bp Feature: domain Description: XylF Location: 1 96761 5-1 968653 bp Feature: gene Location: 2082733-2083401 bp Feature: domain Description: RutF Location: 2082811-2083372 bp Feature: domain Description: RutF Location: 208281 1 -2083372 bp Feature: gene Location: 2083665-2084342 bp Feature: gene Location: 2085017-2086276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2085212-2085830 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 208521 2-2085830 bp Feature: domain Description: GIIM Note: maturase Location: 2085881-2086112 bp Feature: domain Description: GIIM Note: maturase Location: 2085881 -20861 1 2 bp Feature: gene Location: 2086866-2087309 bp Feature: domain Description: SUF_scaf_2 Location: 2086872-2087280 bp Feature: domain Description: SUF_scaf_2 Location: 2086872-2087280 bp Feature: gene Location: 2087346-2088350 bp Feature: domain Description: YejR Location: 2087382-2088345 bp Feature: domain Description: YejR Location: 2087382-2088345 bp Feature: gene Location: 2103591-2104871 bp Feature: domain Description: COG1233 Location: 2103603-2103813 bp Feature: domain Description: COG1 233 Location: 21 03603-21 0381 3 bp Feature: domain Description: COG1233 Location: 2103990-2104821 bp Feature: domain Description: COG1 233 Location: 21 03990-21 04821 bp Feature: gene Location: 2105053-2105931 bp Feature: domain Description: ED_TypeI_classII_C Location: 2105086-2105428 bp Feature: domain Description: ED_TypeI_classII_C Location: 21 05086-21 05428 bp Feature: domain Description: ED_TypeI_classII_C Location: 2105464-2105806 bp Feature: domain Description: ED_TypeI_classII_C Location: 21 05464-21 05806 bp Feature: gene Location: 2106695-2107966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2106914-2107541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 0691 4-21 07541 bp Feature: domain Description: GIIM Note: maturase Location: 2107586-2107814 bp Feature: domain Description: GIIM Note: maturase Location: 21 07586-21 0781 4 bp Feature: gene Location: 2108182-2108904 bp Feature: domain Description: FadR Location: 2108197-2108887 bp Feature: domain Description: FadR Location: 21 081 97-21 08887 bp Feature: gene Location: 2109076-2109774 bp Feature: domain Description: MhpC Location: 2109097-2109757 bp Feature: domain Description: MhpC Location: 21 09097-21 09757 bp Feature: gene Location: 2140215-2140397 bp Feature: gene Location: 2140518-2140673 bp Feature: gene Location: 2140933-2142099 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2141155-2141776 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 41 1 55-21 41 776 bp Feature: domain Description: GIIM Note: maturase Location: 2141818-2142040 bp Feature: domain Description: GIIM Note: maturase Location: 21 41 81 8-21 42040 bp Feature: gene Location: 2142320-2144119 bp Feature: domain Description: BetT Location: 2142584-2144096 bp Feature: domain Description: BetT Location: 21 42584-21 44096 bp Feature: gene Location: 2144079-2144951 bp Feature: domain Description: HTH_ARAC Location: 2144145-2144391 bp Feature: domain Description: HTH_ARAC Location: 21 441 45-21 44391 bp Feature: domain Description: YdeE Location: 2144463-2144949 bp Feature: domain Description: YdeE Location: 21 44463-21 44949 bp Feature: gene Location: 2408089-2408988 bp Feature: domain Description: MhpC Location: 2408143-2408977 bp Feature: domain Description: MhpC Location: 24081 43-2408977 bp Feature: gene Location: 2409010-2409750 bp Feature: domain Description: BKR_SDR_c Location: 2409028-2409745 bp Feature: domain Description: BKR_SDR_c Location: 2409028-2409745 bp Feature: gene Location: 2410593-2411864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2410812-2411439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 241 081 2-241 1 439 bp Feature: domain Description: GIIM Note: maturase Location: 2411484-2411712 bp Feature: domain Description: GIIM Note: maturase Location: 241 1 484-241 1 71 2 bp Feature: gene Location: 2411958-2412209 bp Feature: gene Location: 2412552-2413922 bp Feature: domain Description: ALDH_YwdH-P39616 Location: 2412573-2413908 bp Feature: domain Description: ALDH_YwdH-P3961 6 Location: 241 2573-241 3908 bp Feature: gene Location: 2694099-2695166 bp Feature: domain Description: COG4603 Location: 2694120-2695158 bp Feature: domain Description: COG4603 Location: 26941 20-26951 58 bp Feature: gene Location: 2695167-2696129 bp Feature: domain Description: YufQ Location: 2695170-2696121 bp Feature: domain Description: YufQ Location: 26951 70-26961 21 bp Feature: gene Location: 2696880-2698151 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2697099-2697726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2697099-2697726 bp Feature: domain Description: GIIM Note: maturase Location: 2697771-2697999 bp Feature: domain Description: GIIM Note: maturase Location: 2697771 -2697999 bp Feature: gene Location: 2698387-2699088 bp Feature: domain Description: DUF2225 Location: 2698417-2699056 bp Feature: domain Description: DUF2225 Location: 269841 7-2699056 bp Feature: gene Location: 2699180-2699644 bp Feature: domain Description: CheX Location: 2699183-2699630 bp Feature: domain Description: CheX Location: 26991 83-2699630 bp Feature: gene Location: 2750579-2751511 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 2751131-2751455 bp Feature: domain Description: STAS_RsbR_RsbS_like Location: 2751 1 31 -2751 455 bp Feature: gene Location: 2751737-2752387 bp Feature: domain Description: spore_safA Location: 2751830-2751959 bp Feature: domain Description: spore_safA Location: 2751 830-2751 959 bp Feature: domain Description: spore_YkwD Location: 2752007-2752379 bp Feature: domain Description: spore_YkwD Location: 2752007-2752379 bp Feature: gene Location: 2753143-2754414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2753362-2753989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2753362-2753989 bp Feature: domain Description: GIIM Note: maturase Location: 2754034-2754262 bp Feature: domain Description: GIIM Note: maturase Location: 2754034-2754262 bp Feature: gene Location: 2755139-2755978 bp Feature: domain Description: R_switched_YkoY Location: 2755190-2755883 bp Feature: domain Description: R_switched_YkoY Location: 27551 90-2755883 bp Feature: gene Location: 2756145-2756597 bp Feature: domain Description: Acetyltransf_1 Location: 2756220-2756523 bp Feature: domain Description: Acetyltransf_1 Location: 2756220-2756523 bp Feature: gene Location: 3131437-3132669 bp Feature: domain Description: DUF3137 Location: 3132085-3132343 bp Feature: domain Description: DUF31 37 Location: 31 32085-31 32343 bp Feature: domain Description: DUF3137 Location: 3132469-3132643 bp Feature: domain Description: DUF31 37 Location: 31 32469-31 32643 bp Feature: gene Location: 3132690-3133253 bp Feature: domain Description: LemA Location: 3132801-3133239 bp Feature: domain Description: LemA Location: 31 32801 -31 33239 bp Feature: gene Location: 3133873-3135132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3134068-3134686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 34068-31 34686 bp Feature: domain Description: GIIM Note: maturase Location: 3134737-3134968 bp Feature: domain Description: GIIM Note: maturase Location: 31 34737-31 34968 bp Feature: gene Location: 3136005-3137075 bp Feature: domain Description: COG4825 Location: 3136023-3136980 bp Feature: domain Description: COG4825 Location: 31 36023-31 36980 bp Feature: gene Location: 3137065-3137724 bp Feature: domain Description: DPM_DPG-synthase_like Location: 3137080-3137575 bp Feature: domain Description: DPM_DPG-synthase_like Location: 31 37080-31 37575 bp Feature: gene Location: 3221043-3221612 bp Feature: domain Description: SpoVAE Location: 3221061-3221598 bp Feature: domain Description: SpoVAE Location: 3221 061 -3221 598 bp Feature: gene Location: 3221602-3223092 bp Feature: domain Description: GerA Location: 3221698-3223051 bp Feature: domain Description: GerA Location: 3221 698-3223051 bp Feature: gene Location: 3224000-3225259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3224195-3224813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32241 95-322481 3 bp Feature: domain Description: GIIM Note: maturase Location: 3224864-3225095 bp Feature: domain Description: GIIM Note: maturase Location: 3224864-3225095 bp Feature: gene Location: 3225379-3226722 bp Feature: domain Description: lysA Location: 3225409-3226669 bp Feature: domain Description: lysA Location: 3225409-3226669 bp Feature: gene Location: 3227131-3227568 bp Feature: domain Description: PpiB Location: 3227161-3227554 bp Feature: domain Description: PpiB Location: 32271 61 -3227554 bp Feature: gene Location: 3387196-3387762 bp Feature: domain Description: DUF772 Location: 3387208-3387433 bp Feature: domain Description: DUF772 Location: 3387208-3387433 bp Feature: gene Location: 3387752-3388402 bp Feature: domain Description: DDE_Tnp_1_6 Location: 3388025-3388379 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 3388025-3388379 bp Feature: gene Location: 3389274-3390545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3389493-3390120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3389493-33901 20 bp Feature: domain Description: GIIM Note: maturase Location: 3390165-3390393 bp Feature: domain Description: GIIM Note: maturase Location: 33901 65-3390393 bp Feature: gene Location: 3390698-3390874 bp Feature: gene Location: 3391102-3391302 bp Feature: gene Location: 3577479-3577652 bp Feature: gene Location: 3577888-3578913 bp Feature: domain Description: AmpC Location: 3577924-3578866 bp Feature: domain Description: AmpC Location: 3577924-3578866 bp Feature: gene Location: 3579514-3580080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3579709-3580078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3579709-3580078 bp Feature: gene Location: 3580222-3580773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3580225-3580327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3580225-3580327 bp Feature: domain Description: GIIM Note: maturase Location: 3580378-3580609 bp Feature: domain Description: GIIM Note: maturase Location: 3580378-3580609 bp Feature: gene Location: 3580895-3581347 bp Feature: domain Description: KOG3139 Location: 3580979-3581330 bp Feature: domain Description: KOG31 39 Location: 3580979-3581 330 bp Feature: gene Location: 3581387-3581848 bp Feature: domain Description: Nudix_Hydrolase Location: 3581447-3581789 bp Feature: domain Description: Nudix_Hydrolase Location: 3581 447-3581 789 bp Feature: gene Location: 4157485-4158015 bp Feature: domain Description: RimL Location: 4157500-4158013 bp Feature: domain Description: RimL Location: 41 57500-41 5801 3 bp Feature: gene Location: 4158829-4158960 bp Feature: gene Location: 4159966-4161225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4160161-4160779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 601 61 -41 60779 bp Feature: domain Description: GIIM Note: maturase Location: 4160830-4161061 bp Feature: domain Description: GIIM Note: maturase Location: 41 60830-41 61 061 bp Feature: gene Location: 4161709-4161855 bp Feature: gene Location: 4161864-4162475 bp Feature: domain Description: leuD Location: 4161867-4162455 bp Feature: domain Description: leuD Location: 41 61 867-41 62455 bp Feature: gene Location: 4382699-4383556 bp Feature: gene Location: 4383841-4383987 bp Feature: gene Location: 4384152-4385417 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4384623-4384971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4384623-4384971 bp Feature: domain Description: GIIM Note: maturase Location: 4385022-4385253 bp Feature: domain Description: GIIM Note: maturase Location: 4385022-4385253 bp Feature: gene Location: 4385848-4387566 bp Feature: domain Description: GAF Location: 4386691-4387045 bp Feature: domain Description: GAF Location: 4386691 -4387045 bp Feature: domain Description: GGDEF Location: 4387069-4387552 bp Feature: domain Description: GGDEF Location: 4387069-4387552 bp Feature: gene Location: 4387975-4389267 bp Feature: domain Description: FolC Location: 4387984-4389256 bp Feature: domain Description: FolC Location: 4387984-4389256 bp Feature: gene Location: 4523835-4526015 bp Feature: domain Description: PRK09776 Location: 4523985-4524324 bp Feature: domain Description: PRK09776 Location: 4523985-4524324 bp Feature: domain Description: PRK10060 Location: 4524531-4525980 bp Feature: domain Description: PRK1 0060 Location: 4524531 -4525980 bp Feature: gene Location: 4526581-4527795 bp Feature: domain Description: DDE_Tnp_1 Location: 4526950-4527556 bp Feature: domain Description: DDE_Tnp_1 Location: 4526950-4527556 bp Feature: gene Location: 4528085-4532014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4531220-4531568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4531 220-4531 568 bp Feature: domain Description: GIIM Note: maturase Location: 4531619-4531850 bp Feature: domain Description: GIIM Note: maturase Location: 4531 61 9-4531 850 bp Feature: gene Location: 4532415-4534361 bp Feature: domain Description: thrS Location: 4532439-4534353 bp Feature: domain Description: thrS Location: 4532439-4534353 bp Feature: gene Location: 4535021-4535449 bp Feature: domain Description: DUF4267 Location: 4535111-4535423 bp Feature: domain Description: DUF4267 Location: 45351 1 1 -4535423 bp Feature: gene Location: 4848469-4850169 bp Feature: domain Description: Tar Location: 4848934-4850164 bp Feature: domain Description: Tar Location: 4848934-48501 64 bp Feature: gene Location: 4850153-4851805 bp Feature: domain Description: GadA Location: 4850285-4851602 bp Feature: domain Description: GadA Location: 4850285-4851 602 bp Feature: gene Location: 4852403-4853674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4852622-4853249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4852622-4853249 bp Feature: domain Description: GIIM Note: maturase Location: 4853294-4853522 bp Feature: domain Description: GIIM Note: maturase Location: 4853294-4853522 bp Feature: gene Location: 4855477-4856742 bp Feature: domain Description: MFS_OFA_like Location: 4855495-4856680 bp Feature: domain Description: MFS_OFA_like Location: 4855495-4856680 bp Feature: gene Location: 4856882-4858597 bp Feature: domain Description: PRK04319 Location: 4856894-4858592 bp Feature: domain Description: PRK0431 9 Location: 4856894-4858592 bp Feature: gene Location: 5047716-5047886 bp Feature: gene Location: 5048033-5048398 bp Feature: domain Description: YurZ Location: 5048072-5048384 bp Feature: domain Description: YurZ Location: 5048072-5048384 bp Feature: gene Location: 5048767-5050026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5048962-5049580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5048962-5049580 bp Feature: domain Description: GIIM Note: maturase Location: 5049631-5049862 bp Feature: domain Description: GIIM Note: maturase Location: 5049631 -5049862 bp Feature: gene Location: 5050678-5051505 bp Feature: domain Description: PBP2_lipoprotein_Tp32 Location: 5050777-5051494 bp Feature: domain Description: PBP2_lipoprotein_Tp32 Location: 5050777-5051 494 bp Feature: gene Location: 5051525-5052211 bp Feature: domain Description: MetP Location: 5051567-5052209 bp Feature: domain Description: MetP Location: 5051 567-5052209 bp Feature: gene Location: 5057861-5058754 bp Feature: domain Description: YhaK Location: 5057924-5058734 bp Feature: domain Description: YhaK Location: 5057924-5058734 bp Feature: gene Location: 5058886-5059029 bp Feature: gene Location: 5059152-5060423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5059371-5059998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5059371 -5059998 bp Feature: domain Description: GIIM Note: maturase Location: 5060043-5060271 bp Feature: domain Description: GIIM Note: maturase Location: 5060043-5060271 bp Feature: gene Location: 5061265-5063046 bp Feature: domain Description: VLCAD Location: 5061313-5062534 bp Feature: domain Description: VLCAD Location: 5061 31 3-5062534 bp Feature: gene Location: 5063160-5064338 bp Feature: domain Description: PRK07661 Location: 5063163-5064336 bp Feature: domain Description: PRK07661 Location: 50631 63-5064336 bp Feature: gene Location: 5220811-5223687 bp Feature: domain Description: uvrA Location: 5220817-5223628 bp Feature: domain Description: uvrA Location: 522081 7-5223628 bp Feature: gene Location: 5223695-5225692 bp Feature: domain Description: PRK05298 Location: 5223713-5225684 bp Feature: domain Description: PRK05298 Location: 522371 3-5225684 bp Feature: gene Location: 5226151-5227422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5226370-5226997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5226370-5226997 bp Feature: domain Description: GIIM Note: maturase Location: 5227042-5227270 bp Feature: domain Description: GIIM Note: maturase Location: 5227042-5227270 bp Feature: gene Location: 5228198-5229967 bp Feature: domain Description: PDZ_serine_protease Location: 5229143-5229326 bp Feature: domain Description: PDZ_serine_protease Location: 52291 43-5229326 bp Feature: gene Location: 5230458-5230631 bp Feature: gene Location: 5233741-5233974 bp Feature: domain Description: DDE_Tnp_1_6 Location: 5233744-5233885 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 5233744-5233885 bp Feature: gene Location: 5234080-5235567 bp Feature: domain Description: prc Location: 5234332-5235268 bp Feature: domain Description: prc Location: 5234332-5235268 bp Feature: domain Description: PG_binding_1 Location: 5235322-5235484 bp Feature: domain Description: PG_binding_1 Location: 5235322-5235484 bp Feature: gene Location: 5236249-5236911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5236255-5236465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5236255-5236465 bp Feature: domain Description: GIIM Note: maturase Location: 5236516-5236747 bp Feature: domain Description: GIIM Note: maturase Location: 523651 6-5236747 bp Feature: gene Location: 5236942-5237508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5237137-5237506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52371 37-5237506 bp Feature: gene Location: 5238115-5239458 bp Feature: domain Description: CwlO1 Location: 5238145-5238991 bp Feature: domain Description: CwlO1 Location: 52381 45-5238991 bp Feature: domain Description: Peptidase_M23 Location: 5239126-5239432 bp Feature: domain Description: Peptidase_M23 Location: 52391 26-5239432 bp Feature: gene Location: 5239515-5240408 bp Feature: domain Description: FtsX Location: 5239530-5240403 bp Feature: domain Description: FtsX Location: 5239530-5240403 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gyrB (TIGR01059), PRK05560 (DNA gyrase subunit A; Validated), RVT-GII, GIIM (pfam08388), HDGYP (COG2206), DUF2971 (pfam11185), LVIVD (sd00042), MtlA (COG2213), BglG (COG3711), PTS_EIIA_2 (pfam00359)
MtlA2 (COG4668), MarR (pfam01047), MATE_MepA_like (cd13143), YhcF (COG1725), GlpA (COG0578), YjcZ_2, PRK12554 (undecaprenyl pyrophosphate phosphatase; Reviewed), NagC (COG1940), CoxIIa (pfam08113), PotA (COG3842)
GlpG (COG0705), Rsbr_N (pfam08678), STAS_RsbR_RsbS_like (cd07041), INT_ICEBs1_C_like (cd01189), Arm-DNA-bind_4 (pfam14657), Phage_int_SAM_3 (pfam14659), HTH_26 (pfam13443), Saf_2TM (pfam18303), SAVED (pfam18145), RVT-UG7
Hypoth_Ymh (pfam09509), AlbA_2 (pfam04326), DinB_2 (pfam12867), BVR-B_like_SDR_a (cd05244), PBP2_OpuAC_like (cd13639), GbsR (COG1510), CobA_CobO_BtuR (pfam02572), PRK01077 (cobyrinate a,c-diamide synthase), COG4637 (Predicted ATPase ), TOPRIM_OLD (cd01026)
RVT-Retrons, Smc (COG1196), XylF (COG4213), RutF (TIGR03615), SUF_scaf_2 (TIGR01994), YejR (COG0523), COG1233 (Phytoene dehydrogenase-related protein ), ED_TypeI_classII_C (cd08343), FadR (COG2186), MhpC (COG0596)
BetT (COG1292), HTH_ARAC (smart00342), YdeE (COG3708), BKR_SDR_c (cd05333), ALDH_YwdH-P39616 (cd07136), COG4603 (ABC-type uncharacterized transport system, permease component ), YufQ (COG1079), DUF2225 (pfam09986), CheX (pfam13690), spore_safA (TIGR02899)
spore_YkwD (TIGR02909), R_switched_YkoY (TIGR03716), Acetyltransf_1 (pfam00583), DUF3137 (pfam11335), LemA (pfam04011), COG4825 (Uncharacterized membrane-anchored protein ), DPM_DPG-synthase_like (cd04179), SpoVAE (pfam14097), GerA (pfam03323), lysA (TIGR01048)
PpiB (COG0652), DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), AmpC (COG1680), KOG3139 (KOG3139, N-acetyltransferase ), Nudix_Hydrolase (cl00447), RimL (COG1670), leuD (TIGR00171), GAF (smart00065), GGDEF (TIGR00254)
FolC (COG0285), PRK09776 (putative diguanylate cyclase; Provisional), PRK10060 (cyclic di-GMP phosphodiesterase), DDE_Tnp_1 (pfam01609), thrS (TIGR00418), DUF4267 (pfam14087), Tar (COG0840), GadA (COG0076), MFS_OFA_like (cd17353), PRK04319 (acetyl-CoA synthetase; Provisional)
YurZ (COG0599), PBP2_lipoprotein_Tp32 (cd13597), MetP (COG2011), YhaK (COG1741), VLCAD (cd01161), PRK07661 (acetyl-CoA C-acetyltransferase), uvrA (PRK00349), PRK05298 (excinuclease ABC subunit UvrB), PDZ_serine_protease (cd00987), prc (TIGR00225)
PG_binding_1 (pfam01471), CwlO1 (COG3883), Peptidase_M23 (pfam01551), FtsX (pfam02687)