myRT

myRT report for GCA_002336065.1_ASM233606v1

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Seq: DDEC01000131.1 TPA_asm: Alteromonas australica isolate UBA1964 UBA1964_contig_10601, whole genome shotgun sequence (38112 bp)
Overview 1 RT 1: 65-4432 bp Neighborhood of RT #1 [65, 4536] RVT-UG8 RVT-UG3 M48C_Oma1_like SlyB Feature: gene Location: 65-1552 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 569-1013 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 569-1 01 3 bp Feature: gene Location: 1542-2753 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1833-2298 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 833-2298 bp Feature: gene Location: 3043-3840 bp Feature: domain Description: M48C_Oma1_like Location: 3250-3796 bp Feature: domain Description: M48C_Oma1 _like Location: 3250-3796 bp Feature: gene Location: 4048-4536 bp Feature: domain Description: SlyB Location: 4111-4432 bp Feature: domain Description: SlyB Location: 41 1 1 -4432 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, M48C_Oma1_like (cd07342), SlyB (COG3133)

Seq: DDEC01000160.1 TPA_asm: Alteromonas australica isolate UBA1964 UBA1964_contig_8975, whole genome shotgun sequence (39349 bp)
Overview 1 RT 1: 11652-21564 bp Neighborhood of RT #1 [11652, 21740] DUF45 COG0610 RVT-UG5 YjgR YjgR SIR2_2 Feature: gene Location: 11652-12401 bp Feature: domain Description: DUF45 Location: 11760-12375 bp Feature: domain Description: DUF45 Location: 11760-12 375 bp Feature: gene Location: 12416-15697 bp Feature: domain Description: COG0610 Location: 12443-15536 bp Feature: domain Description: COG0610 Location: 12 443-15536 bp Feature: gene Location: 15741-18683 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 16230-16686 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 162 30-16686 bp Feature: gene Location: 18911-20653 bp Feature: domain Description: YjgR Location: 19361-19556 bp Feature: domain Description: YjgR Location: 19361-19556 bp Feature: domain Description: YjgR Location: 20006-20585 bp Feature: domain Description: YjgR Location: 2 0006-2 0585 bp Feature: gene Location: 20655-21740 bp Feature: domain Description: SIR2_2 Location: 21069-21564 bp Feature: domain Description: SIR2 _2 Location: 2 1069-2 1564 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF45 (pfam01863), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG5, YjgR (COG0433), SIR2_2 (pfam13289)