myRT

myRT report for GCA_002336895.1_ASM233689v1

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Seq: DDFC01000036.1 TPA_asm: Verrucomicrobiaceae bacterium UBA1938 UBA1938_contig_2935, whole genome shotgun sequence (251704 bp)
Overview 1 RT 1: 242706-248643 bp Neighborhood of RT #1 [242706, 248894] RVT_N RVT-GII GIIM HTH_17 PRK13959 Feature: gene Location: 242706-242852 bp Feature: gene Location: 243931-244113 bp Feature: gene Location: 244124-245869 bp Feature: RT Description: RVT_N Location: 244202-244448 bp Feature: RT Description: RVT_N Location: 244202-244448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244490-245159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244490-2451 59 bp Feature: domain Description: GIIM Note: maturase Location: 245330-245504 bp Feature: domain Description: GIIM Note: maturase Location: 245330-245504 bp Feature: gene Location: 246914-247204 bp Feature: domain Description: HTH_17 Location: 246977-247142 bp Feature: domain Description: HTH_1 7 Location: 246977-2471 42 bp Feature: gene Location: 247584-248894 bp Feature: domain Description: PRK13959 Location: 247905-248643 bp Feature: domain Description: PRK1 3959 Location: 247905-248643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_17 (pfam12728), PRK13959 (phosphoribosylaminoimidazole-succinocarboxamide synthase; Provisional)

Seq: DDFC01000043.1 TPA_asm: Verrucomicrobiaceae bacterium UBA1938 UBA1938_contig_328, whole genome shotgun sequence (359167 bp)
Overview 1 RT 1: 118092-124281 bp Neighborhood of RT #1 [118092, 124281] RVT-Retrons Feature: gene Location: 118092-119816 bp Feature: gene Location: 119876-121513 bp Feature: gene Location: 121818-123413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 122562-123180 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 2 562 -12 3180 bp Feature: gene Location: 123799-124122 bp Feature: gene Location: 124126-124281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons