myRT

myRT report for GCA_002337565.1_ASM233756v1

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Seq: DDGH01000106.1 TPA_asm: Rhodopirellula sp. UBA1907 UBA1907_contig_1024, whole genome shotgun sequence (121960 bp)
Overview 1 RT 1: 5940-12339 bp Neighborhood of RT #1 [5940, 12488] SHD1 PSCyt1 RVT-GII RVT-GII GIIM RVT-GII GIIM PQQ_2 PQQ Feature: gene Location: 5940-6743 bp Feature: domain Description: SHD1 Location: 5997-6165 bp Feature: domain Description: SHD1 Location: 5997-61 65 bp Feature: domain Description: PSCyt1 Location: 6303-6453 bp Feature: domain Description: PSCyt1 Location: 6303-6453 bp Feature: gene Location: 7257-7457 bp Feature: gene Location: 7529-8431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7928-8405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7928-8405 bp Feature: gene Location: 8634-8777 bp Feature: gene Location: 8950-10206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9154-9814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 54-981 4 bp Feature: domain Description: GIIM Note: maturase Location: 9895-10117 bp Feature: domain Description: GIIM Note: maturase Location: 9895-1 01 1 7 bp Feature: gene Location: 10148-10786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10274-10427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0274-1 0427 bp Feature: domain Description: GIIM Note: maturase Location: 10472-10700 bp Feature: domain Description: GIIM Note: maturase Location: 1 0472-1 0700 bp Feature: gene Location: 10799-11032 bp Feature: gene Location: 11172-12488 bp Feature: domain Description: PQQ_2 Location: 11340-11808 bp Feature: domain Description: PQQ_2 Location: 1 1 340-1 1 808 bp Feature: domain Description: PQQ Location: 11949-12339 bp Feature: domain Description: PQQ Location: 1 1 949-1 2339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SHD1 (pfam03983), PSCyt1 (pfam07635), RVT-GII, GIIM (pfam08388), PQQ_2 (pfam13360), PQQ (smart00564)

Seq: DDGH01000089.1 TPA_asm: Rhodopirellula sp. UBA1907 UBA1907_contig_1253, whole genome shotgun sequence (328086 bp)
Overview 1 RT 1: 317457-324787 bp Neighborhood of RT #1 [317457, 324787] Cupin_2 RVT-Retrons Feature: gene Location: 317457-318623 bp Feature: gene Location: 318867-319271 bp Feature: domain Description: Cupin_2 Location: 319023-319212 bp Feature: domain Description: Cupin_2 Location: 31902 3-3192 12 bp Feature: gene Location: 319340-320968 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 320123-320738 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 32 012 3-32 0738 bp Feature: gene Location: 321240-322913 bp Feature: gene Location: 322910-324787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cupin_2 (pfam07883), RVT-Retrons