myRT

myRT report for GCA_002339435.1_ASM233943v1

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Seq: DDLD01000064.1 TPA_asm: Acinetobacter sp. UBA2581 UBA2581_contig_1070, whole genome shotgun sequence (23248 bp)
Overview 1 RT 1: 18728-23232 bp Neighborhood of RT #1 [18728, 23246] RVT-G2L HsdM RMtype1_S_Ara36733I_TRD1-CR1_like RMtype1_S_SonII-TRD2-CR2_like Feature: gene Location: 18728-18886 bp Feature: gene Location: 19097-19282 bp Feature: gene Location: 19309-20535 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 19531-20185 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 1 9531 -201 85 bp Feature: gene Location: 20677-22251 bp Feature: domain Description: HsdM Location: 20695-22222 bp Feature: domain Description: HsdM Location: 20695-22222 bp Feature: gene Location: 22251-23246 bp Feature: domain Description: RMtype1_S_Ara36733I_TRD1-CR1_like Location: 22296-22842 bp Feature: domain Description: RMtype1 _S_Ara36733I_TRD1 -CR1 _like Location: 22296-22842 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 22902-23232 bp Feature: domain Description: RMtype1 _S_SonII-TRD2-CR2_like Location: 22902-23232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-G2L, HsdM (COG0286), RMtype1_S_Ara36733I_TRD1-CR1_like (cd17268), RMtype1_S_SonII-TRD2-CR2_like (cd17246)

Seq: DDLD01000059.1 TPA_asm: Acinetobacter sp. UBA2581 UBA2581_contig_1307, whole genome shotgun sequence (24728 bp)
Overview 1 RT 1: 18886-23199 bp Neighborhood of RT #1 [18886, 23199] HNH RVT_N RVT-GII GIIM DUF262 Feature: gene Location: 18886-19785 bp Feature: domain Description: HNH Note: nucleases Location: 19603-19735 bp Feature: domain Description: HNH Note: nucleases Location: 19603-19735 bp Feature: gene Location: 20157-20324 bp Feature: gene Location: 20371-22047 bp Feature: domain Description: RVT_N Location: 20431-20674 bp Feature: domain Description: RVT_N Location: 2 0431-2 0674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20719-21355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0719-2 1355 bp Feature: domain Description: GIIM Note: maturase Location: 21409-21640 bp Feature: domain Description: GIIM Note: maturase Location: 2 1409-2 1640 bp Feature: gene Location: 22067-22885 bp Feature: domain Description: DUF262 Location: 22223-22646 bp Feature: domain Description: DUF2 62 Location: 2 2 2 2 3-2 2 646 bp Feature: gene Location: 23026-23199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH (pfam01844), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF262 (pfam03235)

Seq: DDLD01000078.1 TPA_asm: Acinetobacter sp. UBA2581 UBA2581_contig_308, whole genome shotgun sequence (16883 bp)
Overview 1 RT 1: 14204-15876 bp Neighborhood of RT #1 [14204, 16880] RVT-UG8 Feature: gene Location: 14204-14419 bp Feature: gene Location: 14513-14713 bp Feature: gene Location: 15306-16880 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 15426-15876 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 15426-15876 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8