myRT

myRT report for GCA_002340255.1_ASM234025v1

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Seq: DDLS01000137.1 TPA_asm: Cyanobacteria bacterium UBA2566 UBA2566_contig_229, whole genome shotgun sequence (140533 bp)
Overview 1 RT 1: 136102-139142 bp Neighborhood of RT #1 [136102, 139147] dcd RVT_N RVT-GII GIIM HNH dcd Feature: gene Location: 136102-136317 bp Feature: domain Description: dcd Location: 136105-136276 bp Feature: domain Description: dcd Location: 1 361 05-1 36276 bp Feature: gene Location: 136381-136527 bp Feature: gene Location: 136923-138698 bp Feature: RT Description: RVT_N Location: 136953-137196 bp Feature: RT Description: RVT_N Location: 1 36953-1 371 96 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 137241-137910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37241 -1 3791 0 bp Feature: domain Description: GIIM Note: maturase Location: 138009-138243 bp Feature: domain Description: GIIM Note: maturase Location: 1 38009-1 38243 bp Feature: domain Description: HNH Note: nucleases Location: 138456-138591 bp Feature: domain Description: HNH Note: nucleases Location: 1 38456-1 38591 bp Feature: gene Location: 138704-138841 bp Feature: gene Location: 138905-139147 bp Feature: domain Description: dcd Location: 138911-139142 bp Feature: domain Description: dcd Location: 1 3891 1 -1 391 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dcd (PRK00416), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: DDLS01000019.1 TPA_asm: Cyanobacteria bacterium UBA2566 UBA2566_contig_378, whole genome shotgun sequence (29449 bp)
Overview 1 RT 1: 19576-23996 bp Neighborhood of RT #1 [19576, 24151] REC RhaT RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 19576-20829 bp Feature: domain Description: REC Location: 20461-20797 bp Feature: domain Description: REC Location: 2 0461-2 0797 bp Feature: gene Location: 20826-21743 bp Feature: domain Description: RhaT Location: 20838-21720 bp Feature: domain Description: RhaT Location: 2 0838-2 172 0 bp Feature: gene Location: 21980-23158 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 22298-22907 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 2 98-2 2 907 bp Feature: gene Location: 23204-23389 bp Feature: gene Location: 23687-24151 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 23711-23996 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2 3711-2 3996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT REC (smart00448), RhaT (TIGR00776), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: DDLS01000061.1 TPA_asm: Cyanobacteria bacterium UBA2566 UBA2566_contig_512, whole genome shotgun sequence (15454 bp)
Overview 1 RT 1: 11075-15449 bp Neighborhood of RT #1 [11075, 15451] Tn7_Tnp_TnsA_N Tn7_Tnp_TnsA_C rve RVT-GII Feature: gene Location: 11075-12202 bp Feature: gene Location: 12180-14876 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 12408-12672 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 12408-12672 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 12684-12888 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 12684-12888 bp Feature: domain Description: rve Location: 13704-14061 bp Feature: domain Description: rve Location: 13 704-14061 bp Feature: gene Location: 15122-15451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15179-15449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15179-15449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tn7_Tnp_TnsA_N (pfam08722), Tn7_Tnp_TnsA_C (pfam08721), rve (pfam00665), RVT-GII