myRT

myRT report for GCA_002341225.1_ASM234122v1

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Seq: DDNQ01000039.1 TPA_asm: Alteromonas australica isolate UBA2516 UBA2516_contig_8988, whole genome shotgun sequence (106372 bp)
Overview 1 RT 1: 3-4364 bp Neighborhood of RT #1 [3, 4468] RVT-UG8 RVT-UG3 M48C_Oma1_like SlyB Feature: gene Location: 3-1484 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 507-951 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 507-951 bp Feature: gene Location: 1474-2685 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1765-2230 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 765-2230 bp Feature: gene Location: 2975-3772 bp Feature: domain Description: M48C_Oma1_like Location: 3182-3728 bp Feature: domain Description: M48C_Oma1 _like Location: 31 82-3728 bp Feature: gene Location: 3980-4468 bp Feature: domain Description: SlyB Location: 4043-4364 bp Feature: domain Description: SlyB Location: 4043-4364 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, RVT-UG3, M48C_Oma1_like (cd07342), SlyB (COG3133)

Seq: DDNQ01000013.1 TPA_asm: Alteromonas australica isolate UBA2516 UBA2516_contig_9229, whole genome shotgun sequence (101106 bp)
Overview 1 RT 1: 79903-89965 bp Neighborhood of RT #1 [79903, 89991] SIR2_2 YjgR YjgR RVT-UG5 COG0610 DUF45 Feature: gene Location: 79903-80988 bp Feature: domain Description: SIR2_2 Location: 80317-80812 bp Feature: domain Description: SIR2 _2 Location: 80317-80812 bp Feature: gene Location: 80990-82732 bp Feature: domain Description: YjgR Location: 81440-81635 bp Feature: domain Description: YjgR Location: 81440-81635 bp Feature: domain Description: YjgR Location: 82085-82664 bp Feature: domain Description: YjgR Location: 82 085-82 664 bp Feature: gene Location: 82960-85902 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 83449-83905 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 83449-83905 bp Feature: gene Location: 85946-89227 bp Feature: domain Description: COG0610 Location: 85973-89066 bp Feature: domain Description: COG0610 Location: 85973-89066 bp Feature: gene Location: 89242-89991 bp Feature: domain Description: DUF45 Location: 89350-89965 bp Feature: domain Description: DUF45 Location: 89350-89965 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YjgR (COG0433), RVT-UG5, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863)