myRT

myRT report for GCA_002341925.1_ASM234192v1

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Seq: DDOY01000005.1 TPA_asm: Pseudomonas stutzeri isolate UBA2482 UBA2482_contig_1335, whole genome shotgun sequence (9368 bp)
Overview 1 RT 1: 3572-9361 bp Neighborhood of RT #1 [3572, 9366] GAF_2 EAL TIGR02284 RVT-GII GIIM outer_NodT EmrA Feature: gene Location: 3572-4825 bp Feature: domain Description: GAF_2 Location: 3674-4082 bp Feature: domain Description: GAF_2 Location: 3674-4082 bp Feature: domain Description: EAL Location: 4127-4802 bp Feature: domain Description: EAL Location: 41 27-4802 bp Feature: gene Location: 4962-5414 bp Feature: domain Description: TIGR02284 Location: 4980-5391 bp Feature: domain Description: TIGR02284 Location: 4980-5391 bp Feature: gene Location: 5993-7318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6254-6869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6254-6869 bp Feature: domain Description: GIIM Note: maturase Location: 6923-7151 bp Feature: domain Description: GIIM Note: maturase Location: 6923-71 51 bp Feature: gene Location: 7397-8794 bp Feature: domain Description: outer_NodT Location: 7430-8753 bp Feature: domain Description: outer_NodT Location: 7430-8753 bp Feature: gene Location: 8791-9366 bp Feature: domain Description: EmrA Location: 8794-9361 bp Feature: domain Description: EmrA Location: 8794-9361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GAF_2 (pfam13185), EAL (smart00052), TIGR02284 (conserved hypothetical protein), RVT-GII, GIIM (pfam08388), outer_NodT (TIGR01845), EmrA (COG1566)

Seq: DDOY01000129.1 TPA_asm: Pseudomonas stutzeri isolate UBA2482 UBA2482_contig_30, whole genome shotgun sequence (50318 bp)
Overview 1 RT 1: 1562-7088 bp Neighborhood of RT #1 [1562, 7088] DNA_BRE_C RVT-UG5 nitrilase Feature: gene Location: 1562-2509 bp Feature: domain Description: DNA_BRE_C Location: 1919-2312 bp Feature: domain Description: DNA_BRE_C Location: 1919-2 312 bp Feature: gene Location: 2728-2907 bp Feature: gene Location: 2908-5751 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3214-3691 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 32 14-3691 bp Feature: domain Description: nitrilase Location: 4957-5644 bp Feature: domain Description: nitrilase Location: 4957-5644 bp Feature: gene Location: 5880-6161 bp Feature: gene Location: 6195-7088 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DNA_BRE_C (cl00213), RVT-UG5, nitrilase (cl11424)