myRT

myRT report for GCA_002342765.1_ASM234276v1

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Seq: DDQS01000015.1 TPA_asm: Clostridiales bacterium UBA2436 UBA2436_contig_114, whole genome shotgun sequence (142191 bp)
Overview 1 RT 1: 135959-141702 bp Neighborhood of RT #1 [135959, 141884] IstB_IS21 COG5421 RVT-GII GIIM Tra5 Feature: gene Location: 135959-136675 bp Feature: domain Description: IstB_IS21 Location: 136127-136493 bp Feature: domain Description: IstB_IS21 Location: 1 361 27-1 36493 bp Feature: gene Location: 137058-138803 bp Feature: domain Description: COG5421 Location: 137637-138558 bp Feature: domain Description: COG5421 Location: 1 37637-1 38558 bp Feature: gene Location: 139246-140490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139450-140107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 39450-1 401 07 bp Feature: domain Description: GIIM Note: maturase Location: 140188-140407 bp Feature: domain Description: GIIM Note: maturase Location: 1 401 88-1 40407 bp Feature: gene Location: 141057-141884 bp Feature: domain Description: Tra5 Location: 141213-141702 bp Feature: domain Description: Tra5 Location: 1 41 21 3-1 41 702 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21 (pfam01695), COG5421 (Transposase ), RVT-GII, GIIM (pfam08388), Tra5 (COG2801)

Seq: DDQS01000016.1 TPA_asm: Clostridiales bacterium UBA2436 UBA2436_contig_377, whole genome shotgun sequence (16552 bp)
Overview 1 RT 1: 7914-12535 bp Neighborhood of RT #1 [7914, 12535] RVT-Retrons Feature: gene Location: 7914-8852 bp Feature: gene Location: 8855-9715 bp Feature: gene Location: 10103-11092 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10307-10844 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10307-10844 bp Feature: gene Location: 11251-11397 bp Feature: gene Location: 11528-12535 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons