myRT

myRT report for GCA_002343445.1_ASM234344v1

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Seq: DDSP01000020.1 TPA_asm: Chthonomonas sp. UBA2387 UBA2387_contig_9664, whole genome shotgun sequence (22950 bp)
Overview 1 RT 1: 10136-20271 bp Neighborhood of RT #1 [10136, 20495] COG4916 RMtype1_S_Eco933I-TRD2-CR2_like RMtype1_S_Eco933I-TRD2-CR2_like RVT-UG5 nitrilase DUF4145 HsdR HipB ImmA Feature: gene Location: 10136-11323 bp Feature: domain Description: COG4916 Location: 10898-11294 bp Feature: domain Description: COG491 6 Location: 1 0898-1 1 294 bp Feature: gene Location: 11320-12495 bp Feature: domain Description: RMtype1_S_Eco933I-TRD2-CR2_like Location: 11602-11848 bp Feature: domain Description: RMtype1 _S_Eco933I-TRD2-CR2_like Location: 1 1 602-1 1 848 bp Feature: domain Description: RMtype1_S_Eco933I-TRD2-CR2_like Location: 11902-12475 bp Feature: domain Description: RMtype1 _S_Eco933I-TRD2-CR2_like Location: 1 1 902-1 2475 bp Feature: gene Location: 12957-15485 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13002-13458 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 1 3002-1 3458 bp Feature: domain Description: nitrilase Location: 15033-15399 bp Feature: domain Description: nitrilase Location: 1 5033-1 5399 bp Feature: gene Location: 15521-18895 bp Feature: domain Description: DUF4145 Location: 15542-15812 bp Feature: domain Description: DUF41 45 Location: 1 5542-1 581 2 bp Feature: domain Description: HsdR Location: 16085-18833 bp Feature: domain Description: HsdR Location: 1 6085-1 8833 bp Feature: gene Location: 19269-20495 bp Feature: domain Description: HipB Location: 19335-19548 bp Feature: domain Description: HipB Location: 1 9335-1 9548 bp Feature: domain Description: ImmA Location: 19914-20271 bp Feature: domain Description: ImmA Location: 1 991 4-20271 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4916 (Uncharacterized protein ), RMtype1_S_Eco933I-TRD2-CR2_like (cd17253), RVT-UG5, nitrilase (cl11424), DUF4145 (pfam13643), HsdR (COG4096), HipB (COG1396), ImmA (COG2856)