myRT

myRT report for GCA_002344625.1_ASM234462v1

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Seq: DDUE01000046.1 TPA_asm: Rhodocyclaceae bacterium UBA2346 UBA2346_contig_1035, whole genome shotgun sequence (17712 bp)
Overview 1 RT 1: 7119-14072 bp Neighborhood of RT #1 [7119, 14704] SppA_67K TrmB RVT_N RVT-GII GIIM HNHc PRK09692 Feature: gene Location: 7119-8948 bp Feature: domain Description: SppA_67K Location: 7176-8925 bp Feature: domain Description: SppA_67K Location: 71 76-8925 bp Feature: gene Location: 8950-9738 bp Feature: domain Description: TrmB Location: 9046-9700 bp Feature: domain Description: TrmB Location: 9046-9700 bp Feature: gene Location: 10817-12487 bp Feature: RT Description: RVT_N Location: 10871-11108 bp Feature: RT Description: RVT_N Location: 1 0871 -1 1 1 08 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11159-11798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 59-1 1 798 bp Feature: domain Description: GIIM Note: maturase Location: 11849-12083 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 849-1 2083 bp Feature: domain Description: HNHc Note: nucleases Location: 12290-12440 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2290-1 2440 bp Feature: gene Location: 12572-12766 bp Feature: gene Location: 12854-14704 bp Feature: domain Description: PRK09692 Location: 12863-14072 bp Feature: domain Description: PRK09692 Location: 1 2863-1 4072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK09692 (Integrase; provisional), SppA_67K (TIGR00705), TrmB (pfam01978)