myRT

myRT report for GCA_002345205.1_ASM234520v1

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Seq: DDVI01000017.1 TPA_asm: Bdellovibrionaceae bacterium UBA2316 UBA2316_contig_1043, whole genome shotgun sequence (70531 bp)
Overview 1 RT 1: 56341-62473 bp Neighborhood of RT #1 [56341, 62473] TraC-F-type RVT-GII GIIM Feature: gene Location: 56341-58803 bp Feature: domain Description: TraC-F-type Location: 56512-58756 bp Feature: domain Description: TraC-F-type Location: 5651 2-58756 bp Feature: gene Location: 58923-59507 bp Feature: gene Location: 59504-60820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59816-60446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5981 6-60446 bp Feature: domain Description: GIIM Note: maturase Location: 60518-60716 bp Feature: domain Description: GIIM Note: maturase Location: 6051 8-6071 6 bp Feature: gene Location: 60807-61604 bp Feature: gene Location: 61604-62473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraC-F-type (TIGR02746), RVT-GII, GIIM (pfam08388)

Seq: DDVI01000015.1 TPA_asm: Bdellovibrionaceae bacterium UBA2316 UBA2316_contig_12533, whole genome shotgun sequence (17994 bp)
Overview 1 RT 1: 7670-14202 bp Neighborhood of RT #1 [7670, 14202] Calx-beta Calx-beta Calx-beta Calx-beta Calx-beta Calx-beta Gmad1 RVT-DGRs Avd_like Feature: gene Location: 7670-11734 bp Feature: domain Description: Calx-beta Location: 8279-8549 bp Feature: domain Description: Calx-beta Location: 82 79-8549 bp Feature: domain Description: Calx-beta Location: 8714-8885 bp Feature: domain Description: Calx-beta Location: 8714-8885 bp Feature: domain Description: Calx-beta Location: 8924-9215 bp Feature: domain Description: Calx-beta Location: 892 4-92 15 bp Feature: domain Description: Calx-beta Location: 9257-9545 bp Feature: domain Description: Calx-beta Location: 92 57-9545 bp Feature: domain Description: Calx-beta Location: 9590-9866 bp Feature: domain Description: Calx-beta Location: 9590-9866 bp Feature: domain Description: Calx-beta Location: 9908-10199 bp Feature: domain Description: Calx-beta Location: 9908-10199 bp Feature: domain Description: Gmad1 Location: 10403-10835 bp Feature: domain Description: Gmad1 Location: 10403-10835 bp Feature: gene Location: 11749-11922 bp Feature: gene Location: 12143-13045 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12197-12788 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 197-12 788 bp Feature: gene Location: 13185-13556 bp Feature: domain Description: Avd_like Location: 13212-13518 bp Feature: domain Description: Avd_like Location: 132 12 -13518 bp Feature: gene Location: 13516-14202 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), Calx-beta (pfam03160), Gmad1 (pfam10647)

Seq: DDVI01000050.1 TPA_asm: Bdellovibrionaceae bacterium UBA2316 UBA2316_contig_16286, whole genome shotgun sequence (5959 bp)
Overview 1 RT 1: 3034-5958 bp Neighborhood of RT #1 [3034, 5958] HTH_17 Avd_like RVT-DGRs Feature: gene Location: 3034-3708 bp Feature: domain Description: HTH_17 Location: 3040-3169 bp Feature: domain Description: HTH_17 Location: 3 040-3 169 bp Feature: gene Location: 3770-4039 bp Feature: domain Description: Avd_like Location: 3776-4004 bp Feature: domain Description: Avd_like Location: 3 776-4004 bp Feature: gene Location: 4023-5075 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4233-4824 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 423 3 -4824 bp Feature: gene Location: 5416-5958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_17 (pfam12728), Avd_like (cd16376), RVT-DGRs