myRT

myRT report for GCA_002345425.1_ASM234542v1

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Seq: DDWA01000045.1 TPA_asm: Bacillales bacterium UBA2298 UBA2298_contig_14087, whole genome shotgun sequence (12556 bp)
Overview 1 RT 1: 3035-8549 bp Neighborhood of RT #1 [3035, 8590] OmpR BaeS RVT-GII GIIM CHASE4 HDGYP HDGYP Feature: gene Location: 3035-3700 bp Feature: domain Description: OmpR Location: 3038-3686 bp Feature: domain Description: OmpR Location: 3038-3686 bp Feature: gene Location: 3697-4710 bp Feature: domain Description: BaeS Location: 3826-4702 bp Feature: domain Description: BaeS Location: 3826-4702 bp Feature: gene Location: 4802-5257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4805-5012 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4805-501 2 bp Feature: domain Description: GIIM Note: maturase Location: 5078-5246 bp Feature: domain Description: GIIM Note: maturase Location: 5078-5246 bp Feature: gene Location: 5717-7252 bp Feature: domain Description: CHASE4 Location: 5882-6254 bp Feature: domain Description: CHASE4 Location: 5882-6254 bp Feature: domain Description: HDGYP Location: 6575-7220 bp Feature: domain Description: HDGYP Location: 6575-7220 bp Feature: gene Location: 7442-8590 bp Feature: domain Description: HDGYP Location: 7880-8549 bp Feature: domain Description: HDGYP Location: 7880-8549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), BaeS (COG0642), RVT-GII, GIIM (pfam08388), CHASE4 (pfam05228), HDGYP (COG2206)