myRT

myRT report for GCA_002345645.1_ASM234564v1

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Seq: DDWN01000071.1 TPA_asm: Anaerolineales bacterium UBA2285 UBA2285_contig_13946, whole genome shotgun sequence (103339 bp)
Overview 1 RT 1: 81241-89583 bp Neighborhood of RT #1 [81241, 89583] COG5635 pfam03781 COG5635 pfam03781 RVT-DGRs Avd_like Feature: gene Location: 81241-84363 bp Feature: domain Description: COG5635 Location: 82084-83284 bp Feature: domain Description: COG5635 Location: 82084-83284 bp Feature: domain Description: pfam03781 Location: 83620-84343 bp Feature: domain Description: pfam03781 Location: 83620-84343 bp Feature: gene Location: 84447-87530 bp Feature: domain Description: COG5635 Location: 85122-86514 bp Feature: domain Description: COG5635 Location: 851 22-8651 4 bp Feature: domain Description: pfam03781 Location: 86784-87510 bp Feature: domain Description: pfam03781 Location: 86784-8751 0 bp Feature: gene Location: 87659-88729 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 87866-88517 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 87866-8851 7 bp Feature: gene Location: 88726-89061 bp Feature: domain Description: Avd_like Location: 88747-89056 bp Feature: domain Description: Avd_like Location: 88747-89056 bp Feature: gene Location: 89224-89583 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5635 (Predicted NTPase, NACHT family domain ), pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), RVT-DGRs, Avd_like (cd16376)

Seq: DDWN01000050.1 TPA_asm: Anaerolineales bacterium UBA2285 UBA2285_contig_14368, whole genome shotgun sequence (111571 bp)
Overview 1 RT 1: 102836-110697 bp Neighborhood of RT #1 [102836, 110741] ParB DUF4032 DHDPS-like RVT-GII Intron_maturas2 HNHc PRK00024 RVT-GII GIIM HNHc PRK00024 excise Feature: gene Location: 102836-103708 bp Feature: domain Description: ParB Location: 103154-103322 bp Feature: domain Description: ParB Location: 103154-10332 2 bp Feature: domain Description: DUF4032 Location: 103424-103688 bp Feature: domain Description: DUF4032 Location: 10342 4-103688 bp Feature: gene Location: 103718-104641 bp Feature: domain Description: DHDPS-like Location: 103748-104597 bp Feature: domain Description: DHDPS-like Location: 103748-104597 bp Feature: gene Location: 104689-106602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104953-105745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 104953-105745 bp Feature: domain Description: Intron_maturas2 Location: 105826-106108 bp Feature: domain Description: Intron_maturas2 Location: 10582 6-106108 bp Feature: domain Description: HNHc Note: nucleases Location: 106297-106462 bp Feature: domain Description: HNHc Note: nucleases Location: 1062 97-106462 bp Feature: gene Location: 107132-107308 bp Feature: domain Description: PRK00024 Location: 107165-107297 bp Feature: domain Description: PRK0002 4 Location: 107165-1072 97 bp Feature: gene Location: 107391-109097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107673-108351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 107673-108351 bp Feature: domain Description: GIIM Note: maturase Location: 108423-108633 bp Feature: domain Description: GIIM Note: maturase Location: 10842 3-108633 bp Feature: domain Description: HNHc Note: nucleases Location: 108936-109068 bp Feature: domain Description: HNHc Note: nucleases Location: 108936-109068 bp Feature: gene Location: 109652-110230 bp Feature: domain Description: PRK00024 Location: 109685-110219 bp Feature: domain Description: PRK0002 4 Location: 109685-1102 19 bp Feature: gene Location: 110466-110741 bp Feature: domain Description: excise Location: 110553-110697 bp Feature: domain Description: excise Location: 110553-110697 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParB (smart00470), DUF4032 (pfam13224), DHDPS-like (cd00408), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK00024 (DNA repair protein RadC), GIIM (pfam08388), excise (TIGR01764)

Seq: DDWN01000118.1 TPA_asm: Anaerolineales bacterium UBA2285 UBA2285_contig_3361, whole genome shotgun sequence (217564 bp)
Overview 1 RT 1: 117713-123561 bp Neighborhood of RT #1 [117713, 123561] TIR_2 NACHT YfmG RVT-DGRs Avd_like Feature: gene Location: 117713-118636 bp Feature: domain Description: TIR_2 Location: 117740-118076 bp Feature: domain Description: TIR_2 Location: 117740-118076 bp Feature: gene Location: 118653-121418 bp Feature: domain Description: NACHT Location: 119136-119568 bp Feature: domain Description: NACHT Location: 11913 6-119568 bp Feature: domain Description: YfmG Location: 120402-121404 bp Feature: domain Description: YfmG Location: 120402-121404 bp Feature: gene Location: 121532-122677 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 121775-122420 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 121775-122420 bp Feature: gene Location: 122674-123090 bp Feature: domain Description: Avd_like Location: 122695-122998 bp Feature: domain Description: Avd_like Location: 122695-122998 bp Feature: gene Location: 123178-123561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), NACHT (pfam05729), YfmG (COG1262), RVT-DGRs, Avd_like (cd16376)