myRT

myRT report for GCA_002345905.1_ASM234590v1

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Seq: DDWK01000036.1 TPA_asm: Proteiniphilum sp. UBA2288 UBA2288_contig_10684, whole genome shotgun sequence (4569 bp)
Overview 1 RT 1: 3-3850 bp Neighborhood of RT #1 [3, 4041] Glyco_hydro_92 PRK10917 RVT-GII GIIM Feature: gene Location: 3-422 bp Feature: domain Description: Glyco_hydro_92 Location: 9-414 bp Feature: domain Description: Glyco_hydro_92 Location: 9-41 4 bp Feature: gene Location: 430-2523 bp Feature: domain Description: PRK10917 Location: 442-2467 bp Feature: domain Description: PRK1 091 7 Location: 442-2467 bp Feature: gene Location: 2629-4041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2989-3607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2989-3607 bp Feature: domain Description: GIIM Note: maturase Location: 3652-3850 bp Feature: domain Description: GIIM Note: maturase Location: 3652-3850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glyco_hydro_92 (pfam07971), PRK10917 (ATP-dependent DNA helicase RecG; Provisional), RVT-GII, GIIM (pfam08388)

Seq: DDWK01000013.1 TPA_asm: Proteiniphilum sp. UBA2288 UBA2288_contig_15519, whole genome shotgun sequence (68306 bp)
Overview 1 RT 1: 3163-8102 bp Neighborhood of RT #1 [3163, 8102] S_4TM SMODS RVT-UG7 Feature: gene Location: 3163-4029 bp Feature: domain Description: S_4TM Location: 3169-4009 bp Feature: domain Description: S_4TM Location: 3169-4009 bp Feature: gene Location: 4030-4803 bp Feature: domain Description: SMODS Location: 4033-4501 bp Feature: domain Description: SMODS Location: 4033-4501 bp Feature: gene Location: 4992-6584 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5376-5796 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 5376-5796 bp Feature: gene Location: 6758-7273 bp Feature: gene Location: 7431-8102 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT S_4TM (pfam18159), SMODS (pfam18144), RVT-UG7