myRT

myRT report for GCA_002347405.1_ASM234740v1

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Seq: DDXB01000046.1 TPA_asm: Rhodocyclaceae bacterium UBA2271 UBA2271_contig_2250, whole genome shotgun sequence (87213 bp)
Overview 1 RT 1: 52495-57551 bp Neighborhood of RT #1 [52495, 57568] RVT-UG12 RMtype1_S_EcoAO83I-TRD1-CR1_like RMtype1_S_EcoAO83I-TRD1-CR1_like HsdM Feature: gene Location: 52495-52938 bp Feature: gene Location: 52935-53075 bp Feature: gene Location: 53163-54608 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 53400-53844 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 53400-53844 bp Feature: gene Location: 54700-55968 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 54832-55303 bp Feature: domain Description: RMtype1 _S_EcoAO83I-TRD1 -CR1 _like Location: 54832-55303 bp Feature: domain Description: RMtype1_S_EcoAO83I-TRD1-CR1_like Location: 55447-55918 bp Feature: domain Description: RMtype1 _S_EcoAO83I-TRD1 -CR1 _like Location: 55447-5591 8 bp Feature: gene Location: 55958-57568 bp Feature: domain Description: HsdM Location: 56009-57551 bp Feature: domain Description: HsdM Location: 56009-57551 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, RMtype1_S_EcoAO83I-TRD1-CR1_like (cd17267), HsdM (COG0286)

Seq: DDXB01000028.1 TPA_asm: Rhodocyclaceae bacterium UBA2271 UBA2271_contig_2690, whole genome shotgun sequence (88150 bp)
Overview 1 RT 1: 8504-13109 bp Neighborhood of RT #1 [8504, 13273] YhaK OmpA RVT-GII GIIM UxaA UxaA DUF5619 Feature: gene Location: 8504-9376 bp Feature: domain Description: YhaK Location: 8546-9371 bp Feature: domain Description: YhaK Location: 8546-9371 bp Feature: gene Location: 9562-10200 bp Feature: domain Description: OmpA Location: 9643-10189 bp Feature: domain Description: OmpA Location: 9643-10189 bp Feature: gene Location: 10286-10975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10340-10529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10340-1052 9 bp Feature: domain Description: GIIM Note: maturase Location: 10580-10784 bp Feature: domain Description: GIIM Note: maturase Location: 10580-10784 bp Feature: gene Location: 11134-12660 bp Feature: domain Description: UxaA Location: 11170-11383 bp Feature: domain Description: UxaA Location: 11170-11383 bp Feature: domain Description: UxaA Location: 11449-12658 bp Feature: domain Description: UxaA Location: 11449-12 658 bp Feature: gene Location: 12905-13273 bp Feature: domain Description: DUF5619 Location: 12911-13109 bp Feature: domain Description: DUF5619 Location: 12 911-13109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhaK (COG1741), OmpA (pfam00691), RVT-GII, GIIM (pfam08388), UxaA (COG2721), DUF5619 (pfam18505)