myRT

myRT report for GCA_002348205.1_ASM234820v1

Download annotations/find similar RTs

Seq: DDYV01000200.1 TPA_asm: Desulfobacter sp. UBA2225 UBA2225_contig_150608, whole genome shotgun sequence (4160 bp)
Overview 1 RT 1: 1-1604 bp Neighborhood of RT #1 [1, 1621] RVT-CRISPR Cas2_I_II_III CRISPR_Cas6 Feature: gene Location: 1-273 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 22-229 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 22-229 bp Feature: gene Location: 294-581 bp Feature: domain Description: Cas2_I_II_III Location: 312-537 bp Feature: domain Description: Cas2_I_II_III Location: 31 2-537 bp Feature: gene Location: 578-1621 bp Feature: domain Description: CRISPR_Cas6 Location: 1190-1604 bp Feature: domain Description: CRISPR_Cas6 Location: 1 1 90-1 604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas2_I_II_III (cl11442), CRISPR_Cas6 (pfam10040)

Seq: DDYV01000098.1 TPA_asm: Desulfobacter sp. UBA2225 UBA2225_contig_3181, whole genome shotgun sequence (25519 bp)
Overview 1 RT 1: 6107-11772 bp Neighborhood of RT #1 [6107, 11792] DDE_Tnp_ISAZ013 DDE_Tnp_ISAZ013 RVT-UG3 RVT-UG8 INT_C_like_3 Feature: gene Location: 6107-6577 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 6428-6575 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 642 8-6575 bp Feature: gene Location: 6710-7453 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 6716-7442 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 6716-7442 bp Feature: gene Location: 7605-8786 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 7893-8355 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 7893-8355 bp Feature: gene Location: 8779-10722 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 9274-9721 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 92 74-972 1 bp Feature: gene Location: 10770-10967 bp Feature: gene Location: 11199-11792 bp Feature: domain Description: INT_C_like_3 Location: 11241-11772 bp Feature: domain Description: INT_C_like_3 Location: 112 41-11772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_ISAZ013 (pfam07592), RVT-UG3, RVT-UG8, INT_C_like_3 (cd01192)