myRT

myRT report for GCA_002351525.1_ASM235152v1

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Seq: DEGQ01000063.1 TPA_asm: Prevotella sp. UBA2822 UBA2822_contig_2973, whole genome shotgun sequence (44903 bp)
Overview 1 RT 1: 36959-41208 bp Neighborhood of RT #1 [36959, 41483] RVT-UG17 SLATT_5 NA37 Feature: gene Location: 36959-37492 bp Feature: gene Location: 37497-37994 bp Feature: gene Location: 38246-39637 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 38465-39077 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 38465-39077 bp Feature: gene Location: 39796-40407 bp Feature: domain Description: SLATT_5 Location: 39802-40372 bp Feature: domain Description: SLATT_5 Location: 39802-40372 bp Feature: gene Location: 40458-41483 bp Feature: domain Description: NA37 Location: 40497-41208 bp Feature: domain Description: NA37 Location: 40497-41 208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160), NA37 (pfam04245)

Seq: DEGQ01000015.1 TPA_asm: Prevotella sp. UBA2822 UBA2822_contig_4053, whole genome shotgun sequence (93730 bp)
Overview 1 RT 1: 70647-75368 bp Neighborhood of RT #1 [70647, 75430] RVT-GII GIIM ATPase_2 DUF4972 Lipocalin_4 Feature: gene Location: 70647-71042 bp Feature: gene Location: 71092-71532 bp Feature: gene Location: 72007-73392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72349-72946 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72 349-72 946 bp Feature: domain Description: GIIM Note: maturase Location: 73000-73210 bp Feature: domain Description: GIIM Note: maturase Location: 73000-732 10 bp Feature: gene Location: 73689-74825 bp Feature: domain Description: ATPase_2 Location: 73758-74484 bp Feature: domain Description: ATPase_2 Location: 73758-74484 bp Feature: gene Location: 74960-75430 bp Feature: domain Description: DUF4972 Location: 74984-75083 bp Feature: domain Description: DUF4972 Location: 74984-75083 bp Feature: domain Description: Lipocalin_4 Location: 75083-75368 bp Feature: domain Description: Lipocalin_4 Location: 75083-75368 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ATPase_2 (pfam01637), DUF4972 (pfam16342), Lipocalin_4 (pfam13648)